Factsheet for Bra035855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72321	Canola	plastid	91.62	97.77
AT5G63130.2	Thale cress	nucleus	77.49	77.08
Bra038608.1-P	Field mustard	nucleus	78.01	76.8
Bra018071.1-P	Field mustard	plastid	61.26	63.93
VIT_17s0000g09190.t01	Wine grape	cytosol, nucleus, plastid	37.7	45.28
KRH63619	Soybean	plastid	43.98	43.3
KRH54323	Soybean	cytosol, nucleus, plastid	41.88	43.01
KRH03222	Soybean	cytosol	42.41	40.91
PGSC0003DMT400069641	Potato	mitochondrion	36.65	40.46
Bra032936.1-P	Field mustard	plastid	37.7	40.22
Bra016197.1-P	Field mustard	mitochondrion	33.51	38.55
PGSC0003DMT400046652	Potato	plastid	39.27	37.88
Bra025209.1-P	Field mustard	mitochondrion	35.6	37.57
Solyc06g071750.2.1	Tomato	plastid	35.6	35.23
Bra000599.1-P	Field mustard	mitochondrion	29.32	21.13
Bra022508.1-P	Field mustard	nucleus	29.32	19.86
Bra010988.1-P	Field mustard	cytosol, nucleus, plasma membrane	21.99	16.15
Bra006344.1-P	Field mustard	plastid	22.51	12.11
Bra024295.1-P	Field mustard	nucleus	25.13	11.06
Bra031918.1-P	Field mustard	nucleus	25.65	10.34
Bra009393.1-P	Field mustard	nucleus	25.65	10.34
Bra029559.1-P	Field mustard	nucleus	20.94	10.13
Bra018513.1-P	Field mustard	nucleus	23.04	9.91
Bra008633.1-P	Field mustard	plastid	23.04	9.07
Bra017462.1-P	Field mustard	cytosol, plastid	28.8	8.57
Bra022296.1-P	Field mustard	cytosol	25.65	8.28
Bra022297.1-P	Field mustard	nucleus	24.61	8.2
Bra024899.1-P	Field mustard	nucleus, plastid	29.32	7.71
Bra037596.1-P	Field mustard	nucleus	23.56	7.0

Protein Annotations

EnsemblPlants:Bra035855.1	EnsemblPlants:Bra035855.1-P	EnsemblPlantsGene:Bra035855	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF10	PFAM:PF00564
SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0002542115	UniProt:M4F455	MapMan:35.2	:

Description

AT5G63130 (E=3e-078) | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein

Coordinates

chrA09:+:3290301..3290936

Molecular Weight (calculated)

20929.0 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.435

Length

191 amino acids

Sequence
(BLAST)

001: MVVAVDANEK KSGSSLKFLC SYGGKILPRS TDGKLRYVGG HTRVLSLDPS ISFEELTKKL LEFCGYSVDL RCQLPNGDLE TLISVKSDEE LTNIVELHNR
101: VSGAKIKAVL TPPRSHKSPS CSSGGGGDRS PNSRFSATPS PPNSPALAYG RCLQSRYCLP PTDLARRFHQ RSGESYCYAC RVHKGSRLIW H

Best Arabidopsis Sequence Match ( AT5G63130.1 )
(BLAST)

001: MVAVDYTEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVDRSI SFSELMKKLY EFCGYSVDLR CQLPNGDLET LISVKSEEEL AEIVEEYDRI
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH

Arabidopsis Description

At5g63130 [Source:UniProtKB/TrEMBL;Acc:Q9FML0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.