CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39133	Soybean	cytosol	91.42	87.59
Zm00001d003965_P001	Maize	mitochondrion	10.14	59.09
HORVU3Hr1G008310.1	Barley	cytosol	10.92	48.95
VIT_17s0000g03180.t01	Wine grape	nucleus	48.36	48.59
KRH57272	Soybean	cytosol	6.24	43.48
PGSC0003DMT400014442	Potato	nucleus	45.09	42.19
GSMUA_AchrUn_...	Banana	nucleus	25.27	41.97
Solyc03g118870.2.1	Tomato	nucleus	40.72	40.97
CDY68695	Canola	nucleus	34.63	40.36
CDY40994	Canola	cytosol	35.57	40.0
CDY24442	Canola	cytosol	35.57	39.93
Bra037596.1-P	Field mustard	nucleus	39.31	39.19
CDY66514	Canola	nucleus	39.31	39.13
Bra022297.1-P	Field mustard	nucleus	34.95	39.09
KRH35888	Soybean	nucleus	42.9	38.9
AT3G18230.1	Thale cress	nucleus, plastid	40.41	38.89
Bra022296.1-P	Field mustard	cytosol	35.41	38.34
CDX92217	Canola	cytosol	34.95	38.23
KRG90906	Soybean	nucleus, plastid	42.9	38.14
GSMUA_Achr8P18320_001	Banana	nucleus	30.58	37.84
GSMUA_Achr10P...	Banana	nucleus	19.81	37.57
GSMUA_Achr2P07240_001	Banana	nucleus	31.36	36.55
KRH38173	Soybean	nucleus	36.82	36.2
Os01t0139200-01	Rice	nucleus	33.23	31.74
EES00348	Sorghum	nucleus	32.76	31.67
Zm00001d039916_P010	Maize	nucleus	32.45	31.56
GSMUA_Achr1P21240_001	Banana	nucleus	29.49	31.5
Zm00001d008591_P001	Maize	mitochondrion	32.45	31.28
KRH54323	Soybean	cytosol, nucleus, plastid	8.89	30.65
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	33.39	30.57
KRH29762	Soybean	plastid	5.62	30.25
KRH45586	Soybean	plastid	8.58	30.22
KRH63619	Soybean	plastid	9.05	29.9
GSMUA_Achr6P09850_001	Banana	endoplasmic reticulum, extracellular	32.45	29.59
TraesCS3A01G051800.1	Wheat	nucleus	32.14	29.26
TraesCS3D01G050900.1	Wheat	nucleus	30.27	29.26
KRH69636	Soybean	plastid	9.67	29.25
KRH41951	Soybean	nucleus	19.03	28.98
KRH03222	Soybean	cytosol	8.89	28.79
TraesCS3B01G060500.1	Wheat	cytosol	29.49	28.55
KRH74522	Soybean	nucleus	10.14	28.14
KRH49930	Soybean	nucleus	17.78	26.89
KRH26304	Soybean	nucleus	10.92	26.82
KRH06059	Soybean	nucleus	10.92	26.12
KRH10652	Soybean	cytosol	17.47	25.11
KRH21700	Soybean	nucleus	17.0	24.77
KRH16903	Soybean	nucleus	13.42	24.29
HORVU3Hr1G008420.4	Barley	cytosol, nucleus	31.98	24.23
KRH49860	Soybean	nucleus	17.78	24.1
KRH42038	Soybean	cytosol	17.78	23.95
KRH72507	Soybean	cytosol, nucleus, peroxisome	13.1	23.4

Protein Annotations

EMBL:ACUP02004247	EnsemblPlants:KRH48572	EnsemblPlantsGene:GLYMA_07G097900	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF27	PFAM:PF00564
PFscan:PS51745	ProteinID:KRH48572	ProteinID:KRH48572.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277
UniParc:UPI00023390AA	UniProt:A0A0R0J1Q5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:9199620..9202160

Molecular Weight (calculated)

68879.9 Da

IEP (calculated)

5.149

GRAVY (calculated)

-0.318

Length

641 amino acids

Sequence
(BLAST)

001: MDPPPLSAAT QKNHPESVES FSPCFRVAET WTDETLPAVP GAKLRLMCSY GGHIMPRPHD KSLSYIGGDT RIVVVDRHSS LKDLCSRLSR TILNGRPFTL
101: KYQLPNEDLE SLITVTTDED LDNMVEEYDR IMAKGSASSR LRVFLFFTKP EATVSMGSLL DDAKSETWFV DALNNSGMIS RVVSDSAAGD SFVNLDGVGV
201: GGVSASGSSN NLESLPDANK VKNFPEVVQV QSTPGSPMME NSSSSPSFSP SLVNLPPIRV HVDDNGSRLQ QENKVGLVVE EQFAQMTIAS GVKPDDGLVN
301: VVSSAVAVPV IPASVTMASA GVITTSDNVM NRVVCEDDRS DPGFQKPPLP LQLVQPRTSG GVGLPSPDSV ASDSSIAAAN SFSKTVYYQD QVQAALLDNK
401: IVAMPNAKSE ISDQMIQVQG QLQDSGYTLP PQLDPNKQHF QQQKPFVHAS THYIHHPAAT GPVPVSSYYP VYAPPQPQQL HPPIGQQQYP VYVMPVGPTQ
501: VTQPYNMALQ PNIADPNVVA SSRSLMPQSI VTSAAYKDGT PPIYPTKSVS STMASNSGYA PIPTNQFQPQ YVGLHQFHHP PQSIAVAPSS TTTNNNYGYE
601: YGGHVQDQAY YTQQTTTAPL LPQYQSMTPA AAAAALSDAS K

Best Arabidopsis Sequence Match ( AT3G18230.1 )
(BLAST)

001: METPLPPLSQ LTPNPTPAAA VSSAIPAPVK SVAVQQPIDG SPRAVATDTG GIPEPLAAVP GAKLRLMCSF GGHIMPRPHD KSLTYSGGET RIVVVDRRAS
101: LSSLRSRLSS MLLNGRSFTL KYQLPSEDLD SLVTITTDED LENMIEEYDR AASSATATAT QRLRLFLFAN KLETAATMGS LLDGTKSDTW FVDALNQSGL
201: LPRGLSDSAA VNNTLVNLDE ASGGETEIQN LETNVGGENN KRGDLVANGV ISHQEMHMSS MPDSPMMEAA GSSIGSSSSS PSTSNLPPIR VRVSEDQRIE
301: EQLAQMTFSN MQTQRQFDDG VSLMANRPMM IPPGAMNDAA MAYNNAPGDG TAPASNGHVS PEDDRSELGV STGYRKPPLP MQPVTIPPRT VGGYGLTSPD
401: SVASDTSISS ATSFSKPMYY QDQPPALPRA PPVAQPETTS AQSSQVLPQT ENTSAQTTSH VLSQPGTYTT MDQQQQQPLA QQPFLHQGVQ YIPHPSQYIP
501: IYSHQQQNYP VYVMSVPQSQ QYIPAGTPPL YPNSKPGTNS RPEAAQNVYR AAPPQVIQLQ QQHQYMGYAG APQHSTNANA NYGTGAPQHS TNANANYGGP
601: FEYTNSPNET VYYHTQAPAA NTAIPLASPY QSMTPAAAAA ALADMSKQMA LDGGKQQQHM AASQPL

Arabidopsis Description

At3g18230 [Source:UniProtKB/TrEMBL;Acc:Q9LJQ7]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.