Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037596.1-P | Field mustard | nucleus | 74.47 | 77.14 |
| CDY68695 | Canola | nucleus | 63.66 | 77.09 |
| CDY66514 | Canola | nucleus | 74.47 | 77.02 |
| CDY40994 | Canola | cytosol | 64.56 | 75.44 |
| CDY24442 | Canola | cytosol | 64.41 | 75.13 |
| Bra022297.1-P | Field mustard | nucleus | 63.06 | 73.3 |
| CDX92217 | Canola | cytosol | 64.26 | 73.04 |
| Bra022296.1-P | Field mustard | cytosol | 64.71 | 72.8 |
| Zm00001d003965_P001 | Maize | mitochondrion | 9.01 | 54.55 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 9.91 | 46.15 |
| KRH48572 | Soybean | cytosol | 38.89 | 40.41 |
| KRH39133 | Soybean | cytosol | 40.39 | 40.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.27 | 40.16 |
| VIT_17s0000g03180.t01 | Wine grape | nucleus | 37.24 | 38.87 |
| PGSC0003DMT400014442 | Potato | nucleus | 39.34 | 38.25 |
| GSMUA_Achr10P... | Banana | nucleus | 18.92 | 37.28 |
| Solyc03g118870.2.1 | Tomato | nucleus | 35.59 | 37.21 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 26.88 | 34.56 |
| AT2G01190.1 | Thale cress | nucleus, plastid | 37.24 | 34.44 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 13.36 | 32.72 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 26.28 | 31.82 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 27.33 | 30.33 |
| AT1G70640.1 | Thale cress | cytosol | 7.66 | 29.31 |
| Zm00001d039916_P010 | Maize | nucleus | 28.98 | 29.29 |
| Os01t0139200-01 | Rice | nucleus | 29.13 | 28.91 |
| AT3G48240.1 | Thale cress | cytosol, nucleus, plastid | 7.81 | 28.89 |
| EES00348 | Sorghum | nucleus | 28.38 | 28.51 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 29.88 | 28.43 |
| Zm00001d008591_P001 | Maize | mitochondrion | 28.23 | 28.27 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 27.48 | 27.6 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 28.83 | 27.27 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 26.58 | 26.74 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 28.08 | 26.6 |
| AT5G63130.2 | Thale cress | nucleus | 7.66 | 26.56 |
| AT4G05150.1 | Thale cress | nucleus | 18.47 | 25.79 |
| AT5G49920.1 | Thale cress | nucleus | 10.66 | 24.65 |
| AT5G16220.1 | Thale cress | plastid | 16.97 | 23.74 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 28.83 | 22.7 |
| AT5G64430.1 | Thale cress | nucleus | 15.32 | 19.88 |
| AT5G09620.1 | Thale cress | nucleus | 14.41 | 18.08 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.2 | EntrezGene:821351 | ProteinID:AEE76068.1 | ArrayExpress:AT3G18230 | EnsemblPlantsGene:AT3G18230 |
| RefSeq:AT3G18230 | TAIR:AT3G18230 | RefSeq:AT3G18230-TAIR-G | EnsemblPlants:AT3G18230.1 | TAIR:AT3G18230.1 | Unigene:At.19833 |
| ProteinID:BAB01173.1 | EMBL:BT046192 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR000270 |
| RefSeq:NP_188451.1 | InterPro:PB1_dom | PFAM:PF00564 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51745 |
| PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 | UniProt:Q9LJQ7 | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI00000A8275 |
| SEG:seg | : | : | : | : | : |
Description
At3g18230 [Source:UniProtKB/TrEMBL;Acc:Q9LJQ7]
Coordinates
chr3:+:6251315..6254221
Molecular Weight (calculated)
70995.9 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.497
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: METPLPPLSQ LTPNPTPAAA VSSAIPAPVK SVAVQQPIDG SPRAVATDTG GIPEPLAAVP GAKLRLMCSF GGHIMPRPHD KSLTYSGGET RIVVVDRRAS
101: LSSLRSRLSS MLLNGRSFTL KYQLPSEDLD SLVTITTDED LENMIEEYDR AASSATATAT QRLRLFLFAN KLETAATMGS LLDGTKSDTW FVDALNQSGL
201: LPRGLSDSAA VNNTLVNLDE ASGGETEIQN LETNVGGENN KRGDLVANGV ISHQEMHMSS MPDSPMMEAA GSSIGSSSSS PSTSNLPPIR VRVSEDQRIE
301: EQLAQMTFSN MQTQRQFDDG VSLMANRPMM IPPGAMNDAA MAYNNAPGDG TAPASNGHVS PEDDRSELGV STGYRKPPLP MQPVTIPPRT VGGYGLTSPD
401: SVASDTSISS ATSFSKPMYY QDQPPALPRA PPVAQPETTS AQSSQVLPQT ENTSAQTTSH VLSQPGTYTT MDQQQQQPLA QQPFLHQGVQ YIPHPSQYIP
501: IYSHQQQNYP VYVMSVPQSQ QYIPAGTPPL YPNSKPGTNS RPEAAQNVYR AAPPQVIQLQ QQHQYMGYAG APQHSTNANA NYGTGAPQHS TNANANYGGP
601: FEYTNSPNET VYYHTQAPAA NTAIPLASPY QSMTPAAAAA ALADMSKQMA LDGGKQQQHM AASQPL
101: LSSLRSRLSS MLLNGRSFTL KYQLPSEDLD SLVTITTDED LENMIEEYDR AASSATATAT QRLRLFLFAN KLETAATMGS LLDGTKSDTW FVDALNQSGL
201: LPRGLSDSAA VNNTLVNLDE ASGGETEIQN LETNVGGENN KRGDLVANGV ISHQEMHMSS MPDSPMMEAA GSSIGSSSSS PSTSNLPPIR VRVSEDQRIE
301: EQLAQMTFSN MQTQRQFDDG VSLMANRPMM IPPGAMNDAA MAYNNAPGDG TAPASNGHVS PEDDRSELGV STGYRKPPLP MQPVTIPPRT VGGYGLTSPD
401: SVASDTSISS ATSFSKPMYY QDQPPALPRA PPVAQPETTS AQSSQVLPQT ENTSAQTTSH VLSQPGTYTT MDQQQQQPLA QQPFLHQGVQ YIPHPSQYIP
501: IYSHQQQNYP VYVMSVPQSQ QYIPAGTPPL YPNSKPGTNS RPEAAQNVYR AAPPQVIQLQ QQHQYMGYAG APQHSTNANA NYGTGAPQHS TNANANYGGP
601: FEYTNSPNET VYYHTQAPAA NTAIPLASPY QSMTPAAAAA ALADMSKQMA LDGGKQQQHM AASQPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.