Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010988.1-P Field mustard cytosol, nucleus, plasma membrane 62.5 65.38
CDY36115 Canola cytosol, nucleus, vacuole 62.13 65.25
CDY24410 Canola cytosol 59.19 62.4
Zm00001d003965_P001 Maize mitochondrion 18.01 44.55
HORVU3Hr1G008310.1 Barley cytosol 15.81 30.07
AT1G70640.1 Thale cress cytosol 18.75 29.31
AT3G48240.1 Thale cress cytosol, nucleus, plastid 17.28 26.11
AT5G63130.2 Thale cress nucleus 18.38 26.04
GSMUA_Achr10P... Banana nucleus 26.1 21.01
GSMUA_AchrUn_... Banana nucleus 28.68 20.21
AT5G49920.1 Thale cress nucleus 19.85 18.75
GSMUA_Achr8P18320_001 Banana nucleus 32.35 16.99
GSMUA_Achr2P07240_001 Banana nucleus 31.25 15.45
AT5G16220.1 Thale cress plastid 26.84 15.34
GSMUA_Achr1P21240_001 Banana nucleus 31.62 14.33
EES00348 Sorghum nucleus 34.19 14.03
Zm00001d008591_P001 Maize mitochondrion 33.46 13.68
Zm00001d039916_P010 Maize nucleus 33.09 13.66
AT2G01190.1 Thale cress nucleus, plastid 36.03 13.61
GSMUA_Achr11P... Banana plasma membrane, vacuole 34.93 13.57
AT3G18230.1 Thale cress nucleus, plastid 32.72 13.36
Os01t0139200-01 Rice nucleus 32.35 13.11
AT4G05150.1 Thale cress nucleus 22.79 13.0
AT5G09620.1 Thale cress nucleus 25.37 12.99
GSMUA_Achr6P09850_001 Banana endoplasmic reticulum, extracellular 33.46 12.94
AT5G64430.1 Thale cress nucleus 23.9 12.67
TraesCS3D01G050900.1 Wheat nucleus 30.15 12.37
TraesCS3B01G060500.1 Wheat cytosol 29.41 12.08
TraesCS3A01G051800.1 Wheat nucleus 31.25 12.07
HORVU3Hr1G008420.4 Barley cytosol, nucleus 31.62 10.17
Protein Annotations
MapMan:35.2EntrezGene:839114ProteinID:AAG28810.1ProteinID:AEE30604.1ArrayExpress:AT1G25300EnsemblPlantsGene:AT1G25300
RefSeq:AT1G25300TAIR:AT1G25300RefSeq:AT1G25300-TAIR-GEnsemblPlants:AT1G25300.1TAIR:AT1G25300.1Unigene:At.51764
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000270RefSeq:NP_173901.1InterPro:PB1_dom
PFAM:PF00564PANTHER:PTHR31066PANTHER:PTHR31066:SF27UniProt:Q9FRH9SMART:SM00666SUPFAM:SSF54277
UniParc:UPI000009E34FSEG:seg::::
Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRH9]
Coordinates
chr1:+:8871568..8872386
Molecular Weight (calculated)
30604.6 Da
IEP (calculated)
5.603
GRAVY (calculated)
-0.316
Length
272 amino acids
Sequence
(BLAST)
001: MEPQPSLNPK LHLLCSYGGR IMPLPPEKSL HYIGGETRLV IVPRGISFLD FFKLLSDKLL SGRSFSLKYK LPSCDFDSLI TVSDNEDLQN MIAEYDSTRL
101: RRIRLFLFPL NHVELTRQSV TVNRLLGLES PIFTSLSSVL SSPIFAPNNG PVQFVHHNKV NATTAEENRR QDEAASTTSS SMLPQENTSA ANDVGGFLDR
201: ETEIVEIQDQ PRPILQEPLP QQQQQPLIIC YLPVWQMRPH MVTYPVAAYA LTPATEHSPR LDPVPENQEN AT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.