Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010988.1-P | Field mustard | cytosol, nucleus, plasma membrane | 94.59 | 94.23 |
| CDY24410 | Canola | cytosol | 89.58 | 89.92 |
| AT1G25300.1 | Thale cress | cytosol, nucleus, plasma membrane | 65.25 | 62.13 |
| Zm00001d003965_P001 | Maize | mitochondrion | 18.92 | 44.55 |
| HORVU3Hr1G008310.1 | Barley | cytosol | 17.37 | 31.47 |
| CDY66304 | Canola | cytosol | 18.92 | 29.52 |
| CDY61217 | Canola | cytosol, mitochondrion | 18.92 | 29.52 |
| CDY28543 | Canola | plastid | 19.3 | 28.41 |
| CDY48987 | Canola | plastid | 19.3 | 27.93 |
| CDX83621 | Canola | mitochondrion | 19.3 | 27.62 |
| CDY13638 | Canola | mitochondrion | 18.92 | 27.07 |
| CDY41501 | Canola | cytosol | 19.3 | 26.45 |
| CDY39571 | Canola | plastid | 18.15 | 25.68 |
| CDY48161 | Canola | plastid | 18.15 | 25.68 |
| CDX84387 | Canola | nucleus | 19.3 | 25.51 |
| CDY20093 | Canola | extracellular, plasma membrane | 18.92 | 25.26 |
| CDY48129 | Canola | cytosol, nucleus, plastid | 17.76 | 24.08 |
| CDY72321 | Canola | plastid | 16.6 | 24.02 |
| GSMUA_Achr10P... | Banana | nucleus | 28.57 | 21.89 |
| CDY31319 | Canola | nucleus | 23.55 | 21.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.05 | 21.5 |
| CDY21444 | Canola | mitochondrion | 19.3 | 18.94 |
| CDX83177 | Canola | mitochondrion | 19.3 | 18.8 |
| CDY16375 | Canola | nucleus | 19.69 | 18.09 |
| CDX91540 | Canola | nucleus | 19.69 | 18.09 |
| GSMUA_Achr8P18320_001 | Banana | nucleus | 33.98 | 16.99 |
| CDY40994 | Canola | cytosol | 37.07 | 16.84 |
| CDY24442 | Canola | cytosol | 37.07 | 16.81 |
| CDY68695 | Canola | nucleus | 35.52 | 16.73 |
| CDY46377 | Canola | nucleus | 25.48 | 16.67 |
| CDY62874 | Canola | nucleus | 25.48 | 16.62 |
| CDX78676 | Canola | plastid | 28.19 | 16.26 |
| CDX92217 | Canola | cytosol | 36.68 | 16.21 |
| CDX70680 | Canola | plastid | 28.57 | 16.05 |
| GSMUA_Achr2P07240_001 | Banana | nucleus | 33.98 | 16.0 |
| CDX69461 | Canola | plastid | 28.96 | 15.46 |
| CDX91230 | Canola | nucleus | 26.25 | 15.38 |
| CDX97304 | Canola | nucleus | 26.25 | 15.32 |
| CDY25942 | Canola | nucleus, plastid | 36.68 | 15.13 |
| CDY46804 | Canola | nucleus | 27.8 | 15.13 |
| CDY21590 | Canola | nucleus | 27.41 | 14.95 |
| CDX69896 | Canola | nucleus | 27.03 | 14.89 |
| CDY66514 | Canola | nucleus | 36.68 | 14.75 |
| CDY41073 | Canola | nucleus, plastid | 35.91 | 14.74 |
| Zm00001d039916_P010 | Maize | nucleus | 37.07 | 14.57 |
| EES00348 | Sorghum | nucleus | 37.07 | 14.48 |
| Zm00001d008591_P001 | Maize | mitochondrion | 37.07 | 14.44 |
| CDY58263 | Canola | nucleus | 26.64 | 14.4 |
| GSMUA_Achr1P21240_001 | Banana | nucleus | 33.2 | 14.33 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 38.22 | 14.14 |
| CDX84525 | Canola | nucleus | 26.25 | 14.02 |
| Os01t0139200-01 | Rice | nucleus | 36.29 | 14.01 |
| CDY17690 | Canola | nucleus, plastid | 38.61 | 13.81 |
| GSMUA_Achr6P09850_001 | Banana | endoplasmic reticulum, extracellular | 36.68 | 13.51 |
| TraesCS3D01G050900.1 | Wheat | nucleus | 33.98 | 13.27 |
| TraesCS3A01G051800.1 | Wheat | nucleus | 35.14 | 12.93 |
| TraesCS3B01G060500.1 | Wheat | cytosol | 32.82 | 12.84 |
| HORVU3Hr1G008420.4 | Barley | cytosol, nucleus | 35.52 | 10.87 |
Protein Annotations
| EnsemblPlants:CDY36115 | EnsemblPlantsGene:GSBRNA2T00059954001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF27 | PFAM:PF00564 | ProteinID:CDY36115 |
| ProteinID:CDY36115.1 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0004EDD188 | UniProt:A0A078HCJ9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA08g19330DBnaA08g19330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCJ9]
Coordinates
chrLK032367:-:193901..194680
Molecular Weight (calculated)
28816.3 Da
IEP (calculated)
5.620
GRAVY (calculated)
-0.319
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPQAPPLNP KLRLLCSYGG RIMPIPPSNS LEYIGGETRI VAVPRDISFS AFFQVLSGKL LHGRSFSLKY RLPDCDLDSL ITVSNNEDLQ NMIAEYDSAS
101: PQRIRLFLFP SNNPESSSTR HPLSVNLLGL EPPIQKIIYT SSSSVVPFPI FPQNNCTAKQ RVDHGKIHAT SDEDPITSAS LNTGVSDKET EREEIQDQPR
201: RIVVQEPLQQ HQFLAIFYLP VLPMQPHMVT RSVNGYALSP AIEYSTGADP VLENKETAT
101: PQRIRLFLFP SNNPESSSTR HPLSVNLLGL EPPIQKIIYT SSSSVVPFPI FPQNNCTAKQ RVDHGKIHAT SDEDPITSAS LNTGVSDKET EREEIQDQPR
201: RIVVQEPLQQ HQFLAIFYLP VLPMQPHMVT RSVNGYALSP AIEYSTGADP VLENKETAT
001: MEPQPSLNPK LHLLCSYGGR IMPLPPEKSL HYIGGETRLV IVPRGISFLD FFKLLSDKLL SGRSFSLKYK LPSCDFDSLI TVSDNEDLQN MIAEYDSTRL
101: RRIRLFLFPL NHVELTRQSV TVNRLLGLES PIFTSLSSVL SSPIFAPNNG PVQFVHHNKV NATTAEENRR QDEAASTTSS SMLPQENTSA ANDVGGFLDR
201: ETEIVEIQDQ PRPILQEPLP QQQQQPLIIC YLPVWQMRPH MVTYPVAAYA LTPATEHSPR LDPVPENQEN AT
101: RRIRLFLFPL NHVELTRQSV TVNRLLGLES PIFTSLSSVL SSPIFAPNNG PVQFVHHNKV NATTAEENRR QDEAASTTSS SMLPQENTSA ANDVGGFLDR
201: ETEIVEIQDQ PRPILQEPLP QQQQQPLIIC YLPVWQMRPH MVTYPVAAYA LTPATEHSPR LDPVPENQEN AT
Arabidopsis Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRH9]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.