CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032936.1-P	Field mustard	plastid	98.32	98.32
CDY28543	Canola	plastid	93.85	95.45
CDX83621	Canola	mitochondrion	90.5	89.5
CDY13638	Canola	mitochondrion	88.27	87.29
VIT_00s0291g00050.t01	Wine grape	plastid	61.45	56.41
CDY66304	Canola	cytosol	50.84	54.82
CDY61217	Canola	cytosol, mitochondrion	49.72	53.61
KRH29762	Soybean	plastid	34.08	51.26
KRH69636	Soybean	plastid	56.42	47.64
GSMUA_Achr3P19440_001	Banana	plastid	41.9	46.58
CDY20093	Canola	extracellular, plasma membrane	50.28	46.39
KRH74522	Soybean	nucleus	58.1	45.02
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	55.31	42.13
GSMUA_Achr10P...	Banana	cytosol	48.04	41.75
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	50.28	41.28
Solyc05g013530.2.1	Tomato	plastid	50.28	41.1
CDY48161	Canola	plastid	41.34	40.44
CDY41501	Canola	cytosol	42.46	40.21
CDY39571	Canola	plastid	40.78	39.89
CDY48129	Canola	cytosol, nucleus, plastid	42.46	39.79
CDY72321	Canola	plastid	39.66	39.66
CDX84387	Canola	nucleus	43.02	39.29
GSMUA_Achr8P16400_001	Banana	plastid	43.58	38.61
Os11t0444900-01	Rice	cytosol, plastid	44.69	37.04
TraesCS6D01G198500.1	Wheat	plastid	40.78	36.5
TraesCS6B01G245800.1	Wheat	plastid	40.22	36.36
TraesCS6A01G217000.1	Wheat	plastid	40.78	36.32
Os11t0444700-01	Rice	cytosol	44.13	35.27
GSMUA_Achr6P06660_001	Banana	plastid	47.49	35.12
EES09698	Sorghum	cytosol	43.58	33.05
HORVU6Hr1G055230.3	Barley	cytosol	39.66	30.47
Zm00001d049157_P001	Maize	plastid	36.31	28.51
CDY21444	Canola	mitochondrion	35.75	24.24
CDX83177	Canola	mitochondrion	34.64	23.31
CDY16375	Canola	nucleus	35.75	22.7
CDX91540	Canola	nucleus	35.75	22.7
CDY36115	Canola	cytosol, nucleus, vacuole	27.93	19.3
CDY24410	Canola	cytosol	27.37	18.99
CDY31319	Canola	nucleus	29.05	18.64
CDY58263	Canola	nucleus	34.08	12.73
CDY62874	Canola	nucleus	27.93	12.59
CDX84525	Canola	nucleus	34.08	12.58
CDY21590	Canola	nucleus	32.96	12.42
CDY46804	Canola	nucleus	32.96	12.39
CDY46377	Canola	nucleus	27.37	12.37
CDX69896	Canola	nucleus	32.4	12.34
CDX91230	Canola	nucleus	27.93	11.31
CDX97304	Canola	nucleus	27.93	11.26
CDX78676	Canola	plastid	27.37	10.91
CDX70680	Canola	plastid	27.93	10.85
CDY25942	Canola	nucleus, plastid	35.2	10.03
CDX69461	Canola	plastid	26.82	9.9
CDY40994	Canola	cytosol	31.28	9.82
CDY24442	Canola	cytosol	31.28	9.81
CDY41073	Canola	nucleus, plastid	34.08	9.67
CDY68695	Canola	nucleus	29.61	9.64
CDX92217	Canola	cytosol	30.73	9.39
CDY17690	Canola	nucleus, plastid	35.2	8.7
CDY66514	Canola	nucleus	30.73	8.54

Protein Annotations

EnsemblPlants:CDY48987	EnsemblPlantsGene:GSBRNA2T00092187001	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1	PFAM:PF00564	ProteinID:CDY48987
ProteinID:CDY48987.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0004EE30C6	UniProt:A0A078IG73
MapMan:35.2	:	:	:	:	:

Description

BnaA02g28090DBnaA02g28090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG73]

Coordinates

chrLK032805:+:70288..71166

Molecular Weight (calculated)

19630.4 Da

IEP (calculated)

9.657

GRAVY (calculated)

-0.387

Length

179 amino acids

Sequence
(BLAST)

001: MVTNSTIKFL CSYGGKILPR YPDGKLRYNG GHTRVLAVPR SVSFSELASK MAEMCRSTVT IRCQLPTEDL DALVSVTSDE DLANLIEEYD LVSSSSPMKI
101: RVFLNPPKST IAPPRLALPS SNTSSSSSTS SSPRSPAMSK PPLPPSPPRL TTAKNQCYGC YVHRNSRNVY LVHNGNHWQ

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.