CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74522	Soybean	nucleus	89.62	82.25
KRH29762	Soybean	plastid	41.98	74.79
VIT_00s0291g00050.t01	Wine grape	plastid	54.25	58.97
CDX83621	Canola	mitochondrion	49.53	58.01
Bra032936.1-P	Field mustard	plastid	47.64	56.42
CDY48987	Canola	plastid	47.64	56.42
KRH45586	Soybean	plastid	48.11	56.04
CDY28543	Canola	plastid	45.75	55.11
Bra025209.1-P	Field mustard	mitochondrion	46.23	54.14
CDY13638	Canola	mitochondrion	46.23	54.14
AT1G70640.1	Thale cress	cytosol	39.15	47.7
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	50.94	45.96
GSMUA_Achr3P19440_001	Banana	plastid	34.43	45.34
Solyc05g013530.2.1	Tomato	plastid	46.7	45.21
KRH54323	Soybean	cytosol, nucleus, plastid	37.74	43.01
GSMUA_Achr10P...	Banana	cytosol	40.57	41.75
KRH63619	Soybean	plastid	37.74	41.24
GSMUA_Achr8P16400_001	Banana	plastid	38.68	40.59
KRH03222	Soybean	cytosol	37.74	40.4
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	41.51	40.37
KRH57272	Soybean	cytosol	17.45	40.22
TraesCS6B01G245800.1	Wheat	plastid	36.32	38.89
Os11t0444900-01	Rice	cytosol, plastid	39.62	38.89
TraesCS6A01G217000.1	Wheat	plastid	36.32	38.31
TraesCS6D01G198500.1	Wheat	plastid	35.85	38.0
EES09698	Sorghum	cytosol	40.57	36.44
Os11t0444700-01	Rice	cytosol	37.26	35.27
Zm00001d049157_P001	Maize	plastid	36.79	34.21
GSMUA_Achr6P06660_001	Banana	plastid	38.21	33.47
HORVU6Hr1G055230.3	Barley	cytosol	34.91	31.76
KRH06059	Soybean	nucleus	31.13	24.63
KRH26304	Soybean	nucleus	29.72	24.14
KRH41951	Soybean	nucleus	31.13	15.68
KRH49930	Soybean	nucleus	31.13	15.57
KRH21700	Soybean	nucleus	31.6	15.23
KRH10652	Soybean	cytosol	31.6	15.02
KRH72507	Soybean	cytosol, nucleus, peroxisome	23.58	13.93
KRH42038	Soybean	cytosol	31.13	13.87
KRH16903	Soybean	nucleus	23.11	13.84
KRH49860	Soybean	nucleus	29.72	13.32
KRH38173	Soybean	nucleus	31.13	10.12
KRH48572	Soybean	cytosol	29.25	9.67
KRH39133	Soybean	cytosol	29.25	9.27
KRH35888	Soybean	nucleus	29.72	8.91
KRG90906	Soybean	nucleus, plastid	28.77	8.46

Protein Annotations

EMBL:ACUP02000723	EnsemblPlants:KRH69636	EnsemblPlantsGene:GLYMA_02G039000	EntrezGene:100815157	Gene3D:3.10.20.90	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF1
PFAM:PF00564	ProteinID:KRH69635.1	ProteinID:KRH69636	ProteinID:KRH69636.1	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	UniParc:UPI0002337267	UniProt:I1JC75	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr2:+:3642307..3645752

Molecular Weight (calculated)

22952.2 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.407

Length

212 amino acids

Sequence
(BLAST)

001: MFGPTQTASQ PPKSTLKFLC SYGGKILPRY PDGKLRYLGG HTRVLAVDRS IPFSELLLKL EELCGASVRY LRCQLPSEDL DALVSITSDE DLANLIEEYD
101: RVSSLKIRAF LSPPRSPSLK VSTPPSKSAS ISSSSASSSS SSSSYCSPTG ASDSGRRYRA PAPVSDRCVH QMSPSPAAYP VGVEKSKSSG RNIPLPRYGG
201: HVYMIHNGNH WQ

Best Arabidopsis Sequence Match ( AT3G26510.1 )
(BLAST)

001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ

Arabidopsis Description

Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.