CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49930	Soybean	nucleus	88.6	87.97
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	42.52	62.59
PGSC0003DMT400057688	Potato	nucleus	52.97	53.61
Solyc02g079360.1.1	Tomato	nucleus	48.93	53.51
KRH57272	Soybean	cytosol	11.4	52.17
CDY46377	Canola	nucleus	45.37	48.23
CDY62874	Canola	nucleus	45.13	47.86
Bra018513.1-P	Field mustard	nucleus	49.41	46.85
CDX97304	Canola	nucleus	49.41	46.85
CDX91230	Canola	nucleus	49.17	46.83
Bra029559.1-P	Field mustard	nucleus	43.71	46.58
AT4G05150.1	Thale cress	nucleus	50.59	44.65
GSMUA_Achr4P33650_001	Banana	mitochondrion	30.17	40.97
KRH29762	Soybean	plastid	10.45	36.97
HORVU2Hr1G041600.1	Barley	mitochondrion	22.8	31.79
TraesCS2A01G207800.1	Wheat	plastid	27.79	31.54
KRH69636	Soybean	plastid	15.68	31.13
TraesCS2D01G214600.1	Wheat	plastid	27.55	31.1
TraesCS2B01G234400.1	Wheat	plastid	27.32	30.34
EER99518	Sorghum	plastid	27.79	29.85
KRH45586	Soybean	plastid	12.83	29.67
Zm00001d021746_P001	Maize	plastid	26.84	29.5
Zm00001d006574_P001	Maize	plastid	25.89	29.07
KRH03222	Soybean	cytosol	13.54	28.79
KRH74522	Soybean	nucleus	15.68	28.57
KRH54323	Soybean	cytosol, nucleus, plastid	12.59	28.49
KRH63619	Soybean	plastid	12.59	27.32
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	27.32	27.19
KRH26304	Soybean	nucleus	16.63	26.82
KRH06059	Soybean	nucleus	16.39	25.75
KRH72507	Soybean	cytosol, nucleus, peroxisome	21.38	25.07
KRH16903	Soybean	nucleus	20.43	24.29
KRH42038	Soybean	cytosol	25.65	22.69
KRH21700	Soybean	nucleus	23.52	22.5
KRH49860	Soybean	nucleus	25.18	22.41
KRH10652	Soybean	cytosol	23.28	21.97
KRH35888	Soybean	nucleus	32.54	19.38
KXG37356	Sorghum	nucleus	15.91	19.31
KRH39133	Soybean	cytosol	30.64	19.28
KRH38173	Soybean	nucleus	29.69	19.17
KRH48572	Soybean	cytosol	28.98	19.03
KRG90906	Soybean	nucleus, plastid	32.54	19.0

Protein Annotations

EMBL:ACUP02004782	EnsemblPlants:KRH41951	EnsemblPlantsGene:GLYMA_08G060300	EntrezGene:100803004	Gene3D:3.10.20.90	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF4
PFAM:PF00564	ProteinID:KRH41951	ProteinID:KRH41951.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277
UniParc:UPI0001CAB50E	UniProt:I1KQR2	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:4650733..4653115

Molecular Weight (calculated)

45896.7 Da

IEP (calculated)

6.224

GRAVY (calculated)

-0.532

Length

421 amino acids

Sequence
(BLAST)

001: MTSHSHYPPD LDADSVTSSP RSDHFHDAPP RIRFMCSFGG KILPRPHDNQ LRYVGGDTRI VAVNRSITFS ALILKLSKLS GMSNITAKYQ LPNEDLDALI
101: SVTTDEDVEN MMDEYDRVAH NQNPRSARLR LFLFPEGEDS RASSISSLLN GSAKRENWFL DALNGGVSGL ERGRSEASSM VSEVPDYLFG LDNSEEITNH
201: QRDPRPKPGP IIQDNVSVSD PGSPAPVVSS PYCSTSSAPP VPSLPNLPYV KTKPLNLNPV PDTDSKENQT EPETEPHPNL NLNQNPNMYS NNPVVHYPPE
301: AAYSAHSVNP VPVYYVSGPV RPGSVPVPMQ TPYHYVQQSY HAVVPPQVPI GYHPLVPGSG QVYGAGVRHM TPLQPYSPST TAVVHDGLKQ HVYHAVPNSG
401: PVPVHPVIPM TGLDEPQRGG A

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.