Factsheet for TraesCS2D01G214600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G207800.1	Wheat	plastid	96.78	97.3
TraesCS2B01G234400.1	Wheat	plastid	97.32	95.78
HORVU2Hr1G041600.1	Barley	mitochondrion	76.14	94.04
EER99518	Sorghum	plastid	67.56	64.29
Zm00001d021746_P001	Maize	plastid	64.88	63.19
Zm00001d006574_P001	Maize	plastid	62.73	62.4
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	68.63	60.52
GSMUA_Achr4P33650_001	Banana	mitochondrion	31.1	37.42
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	26.81	34.97
Solyc02g079360.1.1	Tomato	nucleus	29.49	28.57
PGSC0003DMT400057688	Potato	nucleus	31.37	28.12
KRH41951	Soybean	nucleus	31.1	27.55
TraesCS6D01G198500.1	Wheat	plastid	14.75	27.5
CDY62874	Canola	nucleus	28.42	26.7
CDX91230	Canola	nucleus	31.64	26.7
Bra018513.1-P	Field mustard	nucleus	31.64	26.58
CDX97304	Canola	nucleus	31.64	26.58
KRH49930	Soybean	nucleus	30.03	26.42
CDY46377	Canola	nucleus	27.88	26.26
Bra029559.1-P	Field mustard	nucleus	26.54	25.06
AT4G05150.1	Thale cress	nucleus	31.37	24.53
TraesCS4D01G029100.1	Wheat	plastid	14.48	21.95
TraesCS3D01G050900.1	Wheat	nucleus	31.1	17.5
TraesCS6D01G365200.1	Wheat	cytosol	21.18	16.16
TraesCS1D01G267100.1	Wheat	nucleus	15.82	16.12

Protein Annotations

EnsemblPlants:TraesCS2D01G214600.1	EnsemblPlantsGene:TraesCS2D01G214600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270
InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF4	PFAM:PF00564	SEG:seg	SMART:SM00666
SUPFAM:SSF54277	TIGR:cd06410	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2D:+:176160851..176162261

Molecular Weight (calculated)

38756.0 Da

IEP (calculated)

5.283

GRAVY (calculated)

-0.359

Length

373 amino acids

Sequence
(BLAST)

001: MTSSSSHHHD ASSATSTPRA GAGSTTSSNG NGNGGGGSHH HPPPPRAQPH GAACVRLMCS FGGRILPRPG DHQLRYVGGE TRIVSVPRTT SHAVLFAALA
101: KLAPALFVPG EPTPALRYQL PHDDLDALIS VSSDDDVDNL MEELDRVHSL AATAIKPPRL RLFLFAASPD HPSAGAFGSV LSGVGDASSD QWFVDQLNAP
201: PPGSIERGRS EASSIVSEVP DYLFGFDTTS EEPSPGAGAQ PKSDAEVAQG DDDDDAPAPV LGAPLVPYVP ESAPWPAPPP PYMAQPVYYV PVRPVHYLNA
301: AAHGGYMPGP VYHIVGGGRN EGPGDLYSSG GVGGVYGVPR SMPPFRQVMY APPPATEAYS VEGKPPEGES HSP

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.