Factsheet for Zm00001d021746_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99518	Sorghum	plastid	90.6	88.52
Zm00001d006574_P001	Maize	plastid	83.81	85.6
TraesCS2A01G207800.1	Wheat	plastid	63.19	65.23
TraesCS2D01G214600.1	Wheat	plastid	63.19	64.88
HORVU2Hr1G041600.1	Barley	mitochondrion	50.91	64.57
TraesCS2B01G234400.1	Wheat	plastid	62.4	63.06
Os07t0556300-01	Rice	endoplasmic reticulum, vacuole	64.49	58.39
Zm00001d003965_P001	Maize	mitochondrion	13.05	45.45
GSMUA_Achr4P33650_001	Banana	mitochondrion	29.77	36.77
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	25.59	34.27
Zm00001d033571_P001	Maize	cytosol	11.75	27.78
Solyc02g079360.1.1	Tomato	nucleus	27.68	27.53
PGSC0003DMT400057688	Potato	nucleus	29.5	27.16
KRH41951	Soybean	nucleus	29.5	26.84
KRH49930	Soybean	nucleus	28.98	26.18
CDX91230	Canola	nucleus	29.24	25.34
Bra018513.1-P	Field mustard	nucleus	29.24	25.23
CDX97304	Canola	nucleus	29.24	25.23
CDY62874	Canola	nucleus	25.59	24.69
CDY46377	Canola	nucleus	25.33	24.49
Zm00001d049157_P001	Maize	plastid	14.1	23.68
Bra029559.1-P	Field mustard	nucleus	24.02	23.29
AT4G05150.1	Thale cress	nucleus	28.46	22.85
Zm00001d033564_P001	Maize	cytosol, plastid	13.32	21.25
Zm00001d051939_P001	Maize	cytosol	25.59	18.22
Zm00001d039916_P010	Maize	nucleus	30.81	17.91
Zm00001d008591_P001	Maize	mitochondrion	29.77	17.14
Zm00001d018447_P001	Maize	extracellular	23.5	16.42
Zm00001d010214_P003	Maize	cytosol	16.19	15.82

Protein Annotations

EMBL:BT087884	EnsemblPlants:Zm00001d021746_P001	EnsemblPlants:Zm00001d021746_T001	EnsemblPlantsGene:Zm00001d021746	EntrezGene:100502353	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF4
PFAM:PF00564	ProteinID:ONM58267.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI0001A4C2BF
UniProt:C4JAN7	MapMan:35.2	:	:	:	:

Description

Octicosapeptide/Phox/Bem1p family protein

Coordinates

chr7:-:162139179..162140330

Molecular Weight (calculated)

40246.1 Da

IEP (calculated)

5.785

GRAVY (calculated)

-0.349

Length

383 amino acids

Sequence
(BLAST)

001: MTSPSSHHPD STSASSTPRA GVGNGGIHHL HPPSLHPAPA PTPAAPPAQA QAAHGGPQVR LMCSFGGRIL PRPGDRQLRY VGGETRIVSF PRAVTSFAAL
101: VAALAKVAPV LFAPGAPRPS LKYQLPQDDL DSLVSITSDD DVDHLMDELD RIQDLSANVA RPPRLRVFLF APAPDAAFGS VFSGTTSEAA STDQWFVDAL
201: NAPAPQPHPT ERGRSEASSI VSEVPDYLFG LETTSGEPSP GPAAARAKSD ATETPRHHDD DECDVPPSAR QMPYVVEGAS SWPAPPPPYM AQPVYYFPVP
301: PPVHYLEPSA QGGYMPRPVY HIVGGGGSEA PGGDLHAAGG VYGVPQHMQA FPPMMYAPPR AVVYNYNSEG MPSLPPEGGA HSS

Best Arabidopsis Sequence Match ( AT4G05150.1 )
(BLAST)

001: MKSNQKKQKS PNYQNPRRQR GEIEREKEAK IMASIPPPEL DNDSLASSPR SEYDSQPRVR FMCTFGGRIL PRPPDNQLCY VGGDNRMVAV HRHTTFASLL
101: SKLAKLSGKS NISVKYQLPN EDLDALISVS TDEDVENMMD EYDRVAQNQN PRASRLRLFL FTKNVAGEED NDSRASSISS LLDSSVNREQ WFLDALNLGS
201: SAAATAVSNG GSGRVFERVR SEVSSIVSEV PDYLFGLDNF DETAPPHELR DRDPRAKIQR EVSTLSDPGS PRRDVPSPYG STSSAPVMRI STPELPPPVF
301: IKPESPEPVS TPKSNPQPEQ VMQQSNLPVN SQWQYAPGPG QQVHYQGHTI HQSPVYYVPG SVPGNHMVQQ GNHMVQPGNH MVQPVQMPGQ YLQQYHHVPM
401: GYHQPQTHQM AGPGQVYGGT VRPVMMAVDG MNRTGYYGMK TPGPVQMYQH HTGMVVPGVE EQQQYRTETD SDTGRAS

Arabidopsis Description

AT4g05150/C17L7_70 [Source:UniProtKB/TrEMBL;Acc:Q940N7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.