Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91169 | Sorghum | cytosol | 82.92 | 81.89 |
| Zm00001d033571_P001 | Maize | cytosol | 39.17 | 58.02 |
| TraesCS4D01G029100.1 | Wheat | plastid | 49.58 | 48.37 |
| TraesCS4A01G281600.1 | Wheat | plastid | 49.58 | 47.98 |
| TraesCS4B01G031400.1 | Wheat | plastid | 48.33 | 45.85 |
| Zm00001d003965_P001 | Maize | mitochondrion | 15.42 | 33.64 |
| Zm00001d049157_P001 | Maize | plastid | 20.42 | 21.49 |
| Zm00001d010214_P003 | Maize | cytosol | 25.0 | 15.31 |
| Zm00001d006574_P001 | Maize | plastid | 21.25 | 13.6 |
| Zm00001d021746_P001 | Maize | plastid | 21.25 | 13.32 |
| HORVU4Hr1G026270.1 | Barley | cytosol | 17.92 | 13.03 |
| Zm00001d051939_P001 | Maize | cytosol | 23.33 | 10.41 |
| Zm00001d018447_P001 | Maize | extracellular | 23.33 | 10.22 |
| Zm00001d008591_P001 | Maize | mitochondrion | 25.83 | 9.32 |
| Zm00001d039916_P010 | Maize | nucleus | 25.0 | 9.1 |
| Os02t0809100-00 | Rice | cytosol, nucleus, plastid | 13.75 | 6.21 |
| HORVU3Hr1G064760.1 | Barley | cytosol | 3.75 | 4.64 |
Protein Annotations
| EnsemblPlants:Zm00001d033564_P001 | EnsemblPlants:Zm00001d033564_T001 | EnsemblPlantsGene:Zm00001d033564 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR31066 | PANTHER:PTHR31066:SF1 | PFAM:PF00564 | ProteinID:ONM07942.1 |
| SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0002215C1F | UniProt:A0A1D6L051 | MapMan:35.2 |
Description
Octicosapeptide/Phox/Bem1p family protein
Coordinates
chr1:-:267275012..267275734
Molecular Weight (calculated)
26115.6 Da
IEP (calculated)
10.551
GRAVY (calculated)
-0.294
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAEAPCDG SVARIRLMCS HGGRFLPRGP DGALRYVGGE TRVLVVPRAA TFPDLTARLS EVAGGAKVRA IRHRLADEGV QDVIVSVTCD EELAHMRDEY
101: DRLRATRPSA TFRVFVTTTT HAGSGRGGAY RRRSAAGLPP LSMEMRRTQS EQVLAVRAHQ QQAMRRVKST QEFAGAIRLQ PSFHRRGNQQ CCSCSQRCNM
201: CAPAPTAAQP VCALPYLSKK VDPPWMPAAK ATEGVFAIRV
101: DRLRATRPSA TFRVFVTTTT HAGSGRGGAY RRRSAAGLPP LSMEMRRTQS EQVLAVRAHQ QQAMRRVKST QEFAGAIRLQ PSFHRRGNQQ CCSCSQRCNM
201: CAPAPTAAQP VCALPYLSKK VDPPWMPAAK ATEGVFAIRV
001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
Arabidopsis Description
Octicosapeptide/Phox/Bem1p family protein [Source:UniProtKB/TrEMBL;Acc:Q27GK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.