Factsheet for PGSC0003DMT400008036

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400009142
PGSC0003DMT400009146
PGSC0003DMT400092162

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64430.1	PGSC0003DMT400009142	AT3G51180.1	21798944
AT5G64430.1	PGSC0003DMT400009146	AT3G51180.1	21798944
AT5G64430.1	PGSC0003DMT400092162	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g106320.2.1	Tomato	extracellular	95.72	95.33
KRH57272	Soybean	cytosol	11.81	63.04
VIT_03s0097g00600.t01	Wine grape	nucleus	51.93	54.6
KRH21700	Soybean	nucleus	45.01	50.23
CDY31319	Canola	nucleus	28.51	50.18
KRH10652	Soybean	cytosol	44.81	49.33
KRH49860	Soybean	nucleus	46.64	48.41
KRH42038	Soybean	cytosol	46.84	48.32
PGSC0003DMT400016330	Potato	nucleus	44.2	47.28
CDY58263	Canola	nucleus	43.18	44.26
CDX84525	Canola	nucleus	43.38	43.92
Bra031918.1-P	Field mustard	nucleus	41.75	43.25
CDX69896	Canola	nucleus	41.14	42.98
CDY46804	Canola	nucleus	41.55	42.86
Bra024295.1-P	Field mustard	nucleus	37.68	42.63
Bra009393.1-P	Field mustard	nucleus	41.14	42.62
PGSC0003DMT400078796	Potato	cytosol	23.42	42.59
AT5G64430.1	Thale cress	nucleus	44.4	42.5
CDY21590	Canola	nucleus	40.94	42.32
AT5G09620.1	Thale cress	nucleus	41.96	38.79
Zm00001d051939_P001	Maize	cytosol	33.6	30.67
PGSC0003DMT400069641	Potato	mitochondrion	10.79	30.64
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	25.66	30.43
Zm00001d018447_P001	Maize	extracellular	33.6	30.11
EES07730	Sorghum	cytosol	34.42	29.86
PGSC0003DMT400046652	Potato	plastid	12.02	29.8
TraesCS6B01G419500.1	Wheat	cytosol	29.33	29.21
TraesCS6A01G380500.1	Wheat	cytosol	31.16	28.76
TraesCS6D01G365200.1	Wheat	cytosol	28.51	28.63
PGSC0003DMT400047888	Potato	cytosol, mitochondrion, plastid	13.44	28.09
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	31.36	27.95
GSMUA_Achr1P05710_001	Banana	cytosol	25.87	26.08
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	14.46	23.91
PGSC0003DMT400057688	Potato	nucleus	19.55	23.08
PGSC0003DMT400097584	Potato	nucleus	16.09	21.47
PGSC0003DMT400015310	Potato	nucleus	25.05	18.66
PGSC0003DMT400067817	Potato	cytosol	19.55	17.24
PGSC0003DMT400014442	Potato	nucleus	22.81	16.35

Protein Annotations

EnsemblPlants:PGSC0003DMT400008036	EnsemblPlantsGene:PGSC0003DMG400003106	EntrezGene:102604916	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF2	PFAM:PF00564
PGSC:PGSC0003DMG400003106	RefSeq:XP_006361994.1	SEG:seg	SMART:SM00666	SUPFAM:SSF54277	UniParc:UPI000296E737
UniProt:M0ZTY1	MapMan:35.2	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003106]

Coordinates

chr1:-:82953614..82955433

Molecular Weight (calculated)

54021.7 Da

IEP (calculated)

6.266

GRAVY (calculated)

-0.661

Length

491 amino acids

Sequence
(BLAST)

001: MENYSYTSYP ESGDSSPRSR EIDFENTAAW EDPNQIPNYK VKFMCSYGGK IHPRPHDNQL AYIGGETKIL SVERNTKFPV LISKLAAICD TDTVSFKYQL
101: PGEDLDALIS VTNDDDLEHM MHEYDRLYRA SPKPARLRLF LFPPNPPATV GSGVSQSQSF GSEDSKSEKD RFVDALNSGP IHASPTAGAV PQQVGNADFL
201: FGSEKGMVPP HVKLRDPNAE QVVKEPEMPV HGVDDRMMGT DPIQKHIQDL QRLHLEEQQN MYRRKSDDNL AAAFPGGDYY VQRGPEKIAS PTVPGTVPAQ
301: VGYWQEKQVP GGVLPSSSLG MEQPVYMIHQ APTGAYHPHQ HQHQHQHPQF VRPMAGPPGQ GYYAVQRMPQ EPYRDQPVYN VMPSLPQAVP TVAAAPPTLQ
401: SQGPPKVAGY SEGYGMVRPG TTMGVGVTDA GGYTQMAYDG GVGRQMYYPP QGGVMAPPQQ QPQYHAMPPQ AVVSSDMRTQ EAAKVVPVKP T

Best Arabidopsis Sequence Match ( AT5G64430.1 )
(BLAST)

001: MEKFSYNSYP DSTDSSPRSR EIEFDNPPPP WDDQNQNQQQ HSYKVKFMCS YGGKIQPRPH DNQLTYVNGE TKILSVDRGI RFPVLASKLS TVCGGGDGGG
101: GEVTFKYQLP GEDLDALISV TNDDDLEHMM HEYDRLLRLS SKPARMRLFL FPASSGFGSQ SSTQSDRDRF VEALNTVPRL SESEKSVTAP PNNADFLFGS
201: EKVAAPPPPP PAEVKLPVPV ALEPPLFNDP RVIQPDHVVN PMEIQRQMQE FQRMHIRDQE QQQQQEAVYR RKSNEDGLIE TGGGYFSPPY IQNPAPPPPQ
301: QTIPQTNPQA PPMTTFWQGN HNPGVVFPTT THGLGLPEQP VYMIPSPSPS PVYHAPPPPQ PQGVIRPILT GQVNQGGYYP QVQRVASDTY REPHQSPYNV
401: AQPLQAPIGT KAAQQQQPPP PQPFTSGPPP PQYTAVPPPR QVVGLPDTSA YTQVTYTGGM GKQVYYTEAP PPQYHGVGLP VTGMSELRTG PDGKLVAMNM
501: APKVSSQSSD SAV

Arabidopsis Description

At5g64430 [Source:UniProtKB/TrEMBL;Acc:Q9FGF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.