Factsheet for VIT_14s0068g01740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07170.t01	Wine grape	cytosol	95.89	40.0
VIT_02s0033g00640.t01	Wine grape	cytosol	94.52	39.43
VIT_00s0291g00050.t01	Wine grape	plastid	34.25	12.82
VIT_17s0000g09190.t01	Wine grape	cytosol, nucleus, plastid	27.4	12.58
VIT_00s0203g00140.t01	Wine grape	cytosol, nucleus, plastid	41.1	10.49
VIT_18s0001g08010.t01	Wine grape	nucleus	61.64	9.16
HORVU3Hr1G075060.1	Barley	cytosol, peroxisome	36.99	9.09
Solyc02g091670.1.1	Tomato	cytosol	31.51	8.52
PGSC0003DMT400078796	Potato	cytosol	30.14	8.15
VIT_03s0097g00600.t01	Wine grape	nucleus	52.05	8.14
GSMUA_Achr1P20460_001	Banana	cytosol, plastid	39.73	7.0
GSMUA_Achr1P05710_001	Banana	cytosol	43.84	6.57
VIT_12s0035g01050.t01	Wine grape	extracellular, golgi	32.88	6.2
EES07730	Sorghum	cytosol	46.58	6.01
Zm00001d018447_P001	Maize	extracellular	43.84	5.84
TraesCS6A01G380500.1	Wheat	cytosol	41.1	5.64
Zm00001d051939_P001	Maize	cytosol	41.1	5.58
HORVU6Hr1G089280.5	Barley	cytosol, mitochondrion, nucleus	41.1	5.44
TraesCS6D01G365200.1	Wheat	cytosol	35.62	5.32
TraesCS6B01G419500.1	Wheat	cytosol	35.62	5.27
VIT_01s0011g04140.t01	Wine grape	nucleus	43.84	4.59
VIT_17s0000g03180.t01	Wine grape	nucleus	39.73	4.55
VIT_14s0006g02490.t01	Wine grape	nucleus	30.14	4.24

Protein Annotations

ArrayExpress:VIT_14s0068g01740	EMBL:FN595232	EnsemblPlants:VIT_14s0068g01740.t01	EnsemblPlantsGene:VIT_14s0068g01740	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000270	InterPro:PB1_dom	PANTHER:PTHR31066	PANTHER:PTHR31066:SF5	PFAM:PF00564
ProteinID:CCB47009	ProteinID:CCB47009.1	SUPFAM:SSF54277	UniParc:UPI0002108133	UniProt:F6H466	MapMan:35.2

Description

No Description!

Coordinates

chr14:-:25441842..25442297

Molecular Weight (calculated)

8530.1 Da

IEP (calculated)

4.295

GRAVY (calculated)

-0.467

Length

73 amino acids

Sequence
(BLAST)

1: MPVAESYKDG WARVRRRVEN RTWIGIDLEG FVRTLPWTSG EVCLKYQLPG EDLNALISVT NDEDLEHMML EYD

Best Arabidopsis Sequence Match ( AT5G09620.1 )
(BLAST)

001: MDKFSYNSYP DSAESSPRSR DVEFENPSPW EDQQQQNYKV KLMCSYGGKI QPRPHDNQLT YVNGDTKIMS VDRGIRFPAL VSKLSAVCSG GGDGGEISFK
101: YQLPGEDLDA LISVTNDEDL EHMMHEYDRL LRLSTKPARM RLFLFPSSPI SGGFGSEGST KSDRDTLNPI PSRPESEKSV TAPPNNADFL FGSEKVAPIP
201: PSPVKVPQPV PEPVVLEPPQ MFVDQRMLQP EHGVNPAEIQ RQIQEFQMIQ IRDQEQQMLH QNQLHQQQQQ QEAIHQNQLH HQQEVIHQNQ LLQQEAIHQN
301: QMLQQQQQQE AMYRRKTEDE AGRYFPPTYT QNPAPVTNQQ PPVGYWQGNT NNSNIQGNIY TTTSQNLPEQ QQQQQQVYMI PAQSQAPGTL YQSVMRPTVQ
401: GNQGYYPSPV QRLHHPDAYM EQQNQPGYNV VQPQPTFSGG PQVMTSVGPQ VMTSVGPPMG LQEPYSQMGK PVYYTVAGEG MMVQPPPAQP QQQQQQYQGM
501: GQPVSGMTDL RTGPDGKVAV NMAAPQVSDS V

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LXC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.