CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89222
EER90021
EER96335
EES16135
KXG38092
KXG39626

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63310.1	EER96335	AT2G04630.1	21798944
AT5G63310.1	KXG38092	AT2G04630.1	21798944
AT5G63310.1	EER89222	AT2G43790.1	12506203
AT5G63310.1	KXG39626	AT3G45640.1	12506203
AT5G63310.1	EER90021	AT5G35410.1	17785451
AT5G63310.1	EES16135	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023833_P001	Maize	plastid	96.4	90.3
TraesCS5D01G104600.2	Wheat	plastid	82.88	83.64
TraesCS5A01G092400.1	Wheat	plastid	82.88	83.26
Os12t0548300-01	Rice	plastid	79.28	80.0
HORVU5Hr1G024250.1	Barley	mitochondrion	83.78	75.0
PGSC0003DMT400039453	Potato	cytosol	54.05	73.62
TraesCS5B01G098300.2	Wheat	cytosol	55.41	71.51
PGSC0003DMT400069352	Potato	mitochondrion	66.22	65.62
Solyc06g071960.2.1	Tomato	plastid	65.77	65.18
EER91919	Sorghum	cytosol	43.69	65.1
EER99399	Sorghum	cytosol	43.69	64.67
VIT_17s0000g10280.t01	Wine grape	plastid	66.22	63.91
GSMUA_AchrUn_...	Banana	plastid	67.12	63.68
KRH57193	Soybean	plastid	63.51	62.67
Solyc03g110960.2.1	Tomato	plastid	65.32	62.23
KRH03909	Soybean	plastid	63.51	62.11
KRH16591	Soybean	mitochondrion	52.25	59.49
AT5G63310.1	Thale cress	plastid	61.26	58.87
Bra038621.1-P	Field mustard	plastid	59.46	56.9
CDY41513	Canola	plastid	59.46	56.9
CDX84395	Canola	plastid	59.46	56.9
CDY48138	Canola	plastid	57.21	55.22
KRG89746	Soybean	plastid	52.25	51.79
KXG23408	Sorghum	plastid	16.22	45.57
KXG22725	Sorghum	mitochondrion	42.34	38.68
KXG30465	Sorghum	plastid	23.87	22.27

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	EntrezGene:8068811
UniProt:C5YPK6	EnsemblPlants:EES16135	ProteinID:EES16135	ProteinID:EES16135.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183
GO:GO:0006228	GO:GO:0006241	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009585
GO:GO:0009605	GO:GO:0009628	GO:GO:0009719	GO:GO:0009734	GO:GO:0009941	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0042542	InterPro:IPR036850	HAMAP:MF_00451
InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243
ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF44	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184
MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220
MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562
EnsemblPlantsGene:SORBI_3008G123600	SUPFAM:SSF54919	unigene:Sbi.8010	UniParc:UPI0001A884AF	RefSeq:XP_002442297.1	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:54648936..54653988

Molecular Weight (calculated)

23947.9 Da

IEP (calculated)

10.000

GRAVY (calculated)

-0.192

Length

222 amino acids

Sequence
(BLAST)

001: METMAALART APPLAGSTRR PSCALRPTAS LSFAAASTTP RGRLGLALST ASAGSGRAAR ARAVPRRIVA SSEVEQSYIM IKPDGVQRGL VGEIISRFEK
101: KGFLLKGLKL FQCPKDLAQE HYKDLKDKPF FPKLIDYITS GPVVCMAWEG DGVVASARKL IGATNPLQAE PGTIRGDLAV QTGRNVVHGS DSPDNGKREI
201: ALWFKEGELC QWESVQTPWL IE

Best Arabidopsis Sequence Match ( AT5G63310.1 )
(BLAST)

001: MVGATVVSKW TPLCVASPPE RNSASLNPHC SPARVNFRTA LAAFRPQFRL FSRNSASRRR LRASSSAESG IFLPHLVASM EDVEETYIMV KPDGIQRGLV
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E

Arabidopsis Description

NDPK2Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:Q0WUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.