CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89065
KRG89746
KRG91449
KRH03685
KRH03909
KRH13399
KRH16591
KRH20252
KRH20755
KRH24954
KRH35367
KRH50176
KRH57193
KRH62918
KRH71277

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G63310.1	KRG91449	AT2G04630.1	21798944
AT5G63310.1	KRH35367	AT2G04630.1	21798944
AT5G63310.1	KRH50176	AT2G43790.1	12506203
AT5G63310.1	KRH71277	AT2G43790.1	12506203
AT5G63310.1	KRG89065	AT3G45640.1	12506203
AT5G63310.1	KRH24954	AT3G45640.1	12506203
AT5G63310.1	KRH13399	AT5G13810.1	21798944
AT5G63310.1	KRH20755	AT5G13810.1	21798944
AT5G63310.1	KRH62918	AT5G13810.1	21798944
AT5G63310.1	KRH03685	AT5G35410.1	17785451
AT5G63310.1	KRH20252	AT5G35410.1	17785451
AT5G63310.1	KRG89746	AT5G63310.1	17785451
AT5G63310.1	KRH03909	AT5G63310.1	17785451
AT5G63310.1	KRH16591	AT5G63310.1	17785451
AT5G63310.1	KRH57193	AT5G63310.1	17785451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16591	Soybean	mitochondrion	81.33	93.85
KRH03909	Soybean	plastid	93.78	92.95
KRG89746	Soybean	plastid	84.0	84.38
VIT_17s0000g10280.t01	Wine grape	plastid	77.78	76.09
PGSC0003DMT400039453	Potato	cytosol	54.67	75.46
PGSC0003DMT400069352	Potato	mitochondrion	69.33	69.64
GSMUA_AchrUn_...	Banana	plastid	71.11	68.38
Solyc03g110960.2.1	Tomato	plastid	70.22	67.81
Solyc06g071960.2.1	Tomato	plastid	67.11	67.41
CDY48138	Canola	plastid	68.44	66.96
CDY41513	Canola	plastid	68.0	65.95
AT5G63310.1	Thale cress	plastid	67.56	65.8
TraesCS5B01G098300.2	Wheat	cytosol	49.78	65.12
Bra038621.1-P	Field mustard	plastid	67.11	65.09
CDX84395	Canola	plastid	66.67	64.66
EES16135	Sorghum	plastid	62.67	63.51
TraesCS5D01G104600.2	Wheat	plastid	61.78	63.18
TraesCS5A01G092400.1	Wheat	plastid	61.33	62.44
KRH48835	Soybean	endoplasmic reticulum, nucleus	41.33	62.42
Os12t0548300-01	Rice	plastid	60.89	62.27
KRH66485	Soybean	endoplasmic reticulum	40.44	61.07
Zm00001d023833_P001	Maize	plastid	63.56	60.34
HORVU5Hr1G024250.1	Barley	mitochondrion	62.67	56.85
KRH41307	Soybean	mitochondrion	42.22	40.25
KRH60038	Soybean	mitochondrion	41.33	39.57
KRH33600	Soybean	cytosol	13.33	38.46
KRH47632	Soybean	cytosol	19.56	36.36
KRH06204	Soybean	endoplasmic reticulum, extracellular	24.0	25.23

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	EntrezGene:100500478	Gene3D:3.30.70.141	MapMan:6.3.2.4
EMBL:ACUP02002815	EnsemblPlantsGene:GLYMA_05G045200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1K081
InterPro:IPR036850	EnsemblPlants:KRH57193	ProteinID:KRH57193	ProteinID:KRH57193.1	HAMAP:MF_00451	InterPro:NDK-like_dom
InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469
PANTHER:PTHR11349	PANTHER:PTHR11349:SF44	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187
MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221
MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562	SUPFAM:SSF54919
UniParc:UPI0001CABA6A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:4018865..4023018

Molecular Weight (calculated)

25018.2 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.229

Length

225 amino acids

Sequence
(BLAST)

001: MEAVCGSVWV TSSLPRSPKS TLSLFRSTHQ HLTAFPSQSH LFLYHPPPYA NAKTLRARTS SKPAIFLPHL IASLEQVDQT YIMVKPDGVQ RGLVGEIISR
101: FEKKGFKLTG LKLFQCSKEL AEEHYKDLKQ KSFFPKLIDY ITSGPVVCMA WEGVGVVASA RKLIGATDPL QAEPGTIRGD LAVQTGRNVV HGSDSPENGK
201: REIALWFKEG EVCEWTPVQA PWLRE

Best Arabidopsis Sequence Match ( AT5G63310.1 )
(BLAST)

001: MVGATVVSKW TPLCVASPPE RNSASLNPHC SPARVNFRTA LAAFRPQFRL FSRNSASRRR LRASSSAESG IFLPHLVASM EDVEETYIMV KPDGIQRGLV
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E

Arabidopsis Description

NDPK2Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:Q0WUG9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.