Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039453 | Potato | cytosol | 63.95 | 67.48 |
| TraesCS5D01G104600.2 | Wheat | plastid | 72.67 | 56.82 |
| TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 49.42 | 56.67 |
| TraesCS5A01G092400.1 | Wheat | plastid | 72.67 | 56.56 |
| EES16135 | Sorghum | plastid | 71.51 | 55.41 |
| Os12t0548300-01 | Rice | plastid | 69.77 | 54.55 |
| KRH16591 | Soybean | mitochondrion | 59.3 | 52.31 |
| Zm00001d023833_P001 | Maize | plastid | 71.51 | 51.9 |
| Solyc06g071960.2.1 | Tomato | plastid | 66.28 | 50.89 |
| PGSC0003DMT400069352 | Potato | mitochondrion | 65.7 | 50.45 |
| HORVU5Hr1G024250.1 | Barley | mitochondrion | 72.09 | 50.0 |
| KRH57193 | Soybean | plastid | 65.12 | 49.78 |
| KRH03909 | Soybean | plastid | 65.12 | 49.34 |
| VIT_17s0000g10280.t01 | Wine grape | plastid | 65.7 | 49.13 |
| GSMUA_AchrUn_... | Banana | plastid | 66.28 | 48.72 |
| Solyc03g110960.2.1 | Tomato | plastid | 65.12 | 48.07 |
| AT5G63310.1 | Thale cress | plastid | 62.79 | 46.75 |
| CDX84395 | Canola | plastid | 62.21 | 46.12 |
| CDY41513 | Canola | plastid | 61.63 | 45.69 |
| Bra038621.1-P | Field mustard | plastid | 61.63 | 45.69 |
| CDY48138 | Canola | plastid | 59.88 | 44.78 |
| KRG89746 | Soybean | plastid | 57.56 | 44.2 |
| TraesCS4B01G102400.2 | Wheat | cytosol | 48.26 | 43.01 |
| TraesCS7B01G282400.1 | Wheat | cytosol | 15.12 | 31.33 |
| TraesCS1B01G478800.1 | Wheat | plastid | 44.77 | 31.05 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | MapMan:6.3.2.4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004550 | GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| InterPro:IPR036850 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | PFAM:PF00334 |
| PRINTS:PR01243 | ScanProsite:PS00469 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF44 | SMART:SM00562 | SUPFAM:SSF54919 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5B01G098300 | EnsemblPlants:TraesCS5B01G098300.2 | TIGR:cd04413 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:-:130511485..130512707
Molecular Weight (calculated)
19499.7 Da
IEP (calculated)
8.573
GRAVY (calculated)
-0.094
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKPDGVQRG LVGEIISRFE KKGFLLKGLK LFQCPKDLAQ EHYKDLKERP FFPNLIDYIT SGPVVCMAWE GDGVVASARK LIGATNPLQA EPGTIRGDLA
101: VQTGRLAPIL SMSSHYYLQY FCCILFDFTS ICTLYVYQRN YHGTLLFRNV VHGSDSPDNG KREIGKFCQW WI
101: VQTGRLAPIL SMSSHYYLQY FCCILFDFTS ICTLYVYQRN YHGTLLFRNV VHGSDSPDNG KREIGKFCQW WI
001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
Arabidopsis Description
NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.