Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G090780.4 | Barley | endoplasmic reticulum | 90.36 | 75.0 |
| KRH33600 | Soybean | cytosol | 57.83 | 61.54 |
| KRH47632 | Soybean | cytosol | 67.47 | 46.28 |
| TraesCS7D01G376900.1 | Wheat | endoplasmic reticulum | 93.98 | 43.33 |
| TraesCS7A01G380500.1 | Wheat | endoplasmic reticulum | 93.98 | 43.33 |
| VIT_09s0002g00950.t01 | Wine grape | cytosol | 71.08 | 41.26 |
| Os02t0565100-01 | Rice | endoplasmic reticulum | 81.93 | 37.57 |
| GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 72.29 | 34.68 |
| Zm00001d050827_P003 | Maize | endoplasmic reticulum | 77.11 | 34.22 |
| CDY66964 | Canola | endoplasmic reticulum | 71.08 | 33.52 |
| CDX96770 | Canola | endoplasmic reticulum | 69.88 | 32.77 |
| AT1G17410.1 | Thale cress | endoplasmic reticulum | 69.88 | 32.04 |
| Solyc12g049370.1.1 | Tomato | endoplasmic reticulum | 66.27 | 31.98 |
| PGSC0003DMT400011148 | Potato | endoplasmic reticulum | 65.06 | 31.4 |
| KXG30465 | Sorghum | plastid | 80.72 | 28.15 |
| KRH06204 | Soybean | endoplasmic reticulum, extracellular | 63.86 | 24.77 |
| TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 32.53 | 18.0 |
| TraesCS5B01G098300.2 | Wheat | cytosol | 31.33 | 15.12 |
| TraesCS4B01G102400.2 | Wheat | cytosol | 31.33 | 13.47 |
| TraesCS1B01G478800.1 | Wheat | plastid | 34.94 | 11.69 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004550 | GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 |
| GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | InterPro:IPR036850 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS |
| PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF64 | SMART:SM00562 |
| SUPFAM:SSF54919 | EnsemblPlantsGene:TraesCS7B01G282400 | EnsemblPlants:TraesCS7B01G282400.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:516791340..516794023
Molecular Weight (calculated)
9099.7 Da
IEP (calculated)
5.061
GRAVY (calculated)
-0.401
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MTSGPVHVMV LESPDAISRW RILIGPTDAR KAKTSHPDSI RAMCGLDSEK NCVHGSDSLQ SAAREISFFF GDDKSEALEH DEL
001: MIKPDGVSGN YTEEIKTIVV EAGFNIVKEM LTQLDKETAS AFYEEHSSRS FFPHLVTYMT SGPVLVMVLE KRNAVSDWRD LIGPTDAEKA KISHPHSIRA
101: LCGKNSQKNC VHGSDSTSSA EREIKFFFKD VVSGDIATQQ HDEL
101: LCGKNSQKNC VHGSDSTSSA EREIKFFFKD VVSGDIATQQ HDEL
Arabidopsis Description
Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.