Factsheet for TraesCS7D01G376900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G380500.1	Wheat	endoplasmic reticulum	94.44	94.44
TraesCS7B01G282400.1	Wheat	cytosol	43.33	93.98
HORVU7Hr1G090750.2	Barley	endoplasmic reticulum, extracellular	69.44	88.65
Os02t0565100-01	Rice	endoplasmic reticulum	77.22	76.8
Zm00001d050827_P003	Maize	endoplasmic reticulum	73.89	71.12
VIT_09s0002g00950.t01	Wine grape	cytosol	53.89	67.83
KRH33600	Soybean	cytosol	26.67	61.54
KRH47632	Soybean	cytosol	40.0	59.5
GSMUA_Achr3P05930_001	Banana	endoplasmic reticulum	56.67	58.96
Solyc12g049370.1.1	Tomato	endoplasmic reticulum	55.56	58.14
PGSC0003DMT400011148	Potato	endoplasmic reticulum	55.0	57.56
CDY66964	Canola	endoplasmic reticulum	55.56	56.82
KXG30465	Sorghum	plastid	74.44	56.3
CDX96770	Canola	endoplasmic reticulum	55.0	55.93
AT1G17410.1	Thale cress	endoplasmic reticulum	55.56	55.25
KRH06204	Soybean	endoplasmic reticulum, extracellular	53.33	44.86
TraesCS1D01G219000.1	Wheat	plastid	27.22	32.45
TraesCS1D01G452300.1	Wheat	cytosol	27.78	30.86
TraesCS4D01G099200.2	Wheat	cytosol	25.56	23.83
TraesCS5D01G104600.2	Wheat	plastid	28.89	23.64

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:50.2.7	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228
GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	InterPro:IPR036850	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS
PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF64	SMART:SM00562
SUPFAM:SSF54919	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G376900	EnsemblPlants:TraesCS7D01G376900.1	:

Description

No Description!

Coordinates

chr7D:+:488544780..488547260

Molecular Weight (calculated)

19778.6 Da

IEP (calculated)

5.608

GRAVY (calculated)

-0.124

Length

180 amino acids

Sequence
(BLAST)

001: MAGAASSVAP VLVICLLSLA LFLHRCRSCE AVERERTLAM IKPDGLSGNY KEKIKEAILG SGFDIIEEAV VHLDAERASL FYAEHADRSF FNSLVKYMTS
101: GPVCAMVLES PDAISRWRNL IGPTDARKAK TSHPDSIRAM CGLDSEKNCV HGSDSPQSAA REISFFFRDD KSEALEHDEL

Best Arabidopsis Sequence Match ( AT1G17410.1 )
(BLAST)

001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L

Arabidopsis Description

Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.