Factsheet for TraesCS1D01G452300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g075470.1.1	Tomato	cytosol	45.06	92.41
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	99.38	66.81
TraesCS1B01G478800.1	Wheat	plastid	99.38	64.92
Zm00001d009774_P001	Maize	mitochondrion	95.06	64.71
Zm00001d039221_P001	Maize	mitochondrion	93.83	64.14
HORVU1Hr1G095400.2	Barley	plastid	98.15	64.11
Zm00001d004713_P001	Maize	endoplasmic reticulum	75.31	63.87
KXG22725	Sorghum	mitochondrion	95.06	63.37
Os05t0595400-01	Rice	plastid	92.59	62.76
PGSC0003DMT400014828	Potato	mitochondrion	89.51	62.5
Solyc08g008340.2.1	Tomato	plastid	90.12	62.39
CDY25267	Canola	plastid	88.89	61.28
Bra033163.1-P	Field mustard	plastid	88.89	61.28
CDX94238	Canola	plastid	88.89	61.28
GSMUA_Achr1P11560_001	Banana	mitochondrion	89.51	61.18
VIT_02s0025g01500.t01	Wine grape	plastid	88.27	60.85
CDX86826	Canola	mitochondrion	88.27	60.59
Bra035260.1-P	Field mustard	mitochondrion	88.27	60.59
PGSC0003DMT400031997	Potato	extracellular	88.89	60.5
Solyc08g082430.2.1	Tomato	plastid	88.89	60.5
GSMUA_Achr4P01100_001	Banana	mitochondrion	88.89	60.5
KRH60038	Soybean	mitochondrion	87.65	60.43
AT4G23900.1	Thale cress	mitochondrion	88.27	60.34
KRH41307	Soybean	mitochondrion	86.42	59.32
AT4G11010.1	Thale cress	mitochondrion, plastid	87.04	59.24
CDY47613	Canola	mitochondrion	85.8	58.65
Bra013742.1-P	Field mustard	mitochondrion	85.8	58.65
TraesCS1D01G219000.1	Wheat	plastid	54.32	58.28
CDY03508	Canola	mitochondrion, plastid	85.19	58.23
TraesCS4D01G099200.2	Wheat	cytosol	54.32	45.6
Zm00001d024444_P001	Maize	plastid	75.93	42.56
TraesCS5D01G104600.2	Wheat	plastid	53.09	39.09
AT4G23895.3	Thale cress	cytosol	88.27	30.62
TraesCS7D01G376900.1	Wheat	endoplasmic reticulum	30.86	27.78
CDY40857	Canola	endoplasmic reticulum, golgi	45.06	21.79

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228
GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	InterPro:IPR036850	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase
InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91
SMART:SM00562	SUPFAM:SSF54919	EnsemblPlantsGene:TraesCS1D01G452300	EnsemblPlants:TraesCS1D01G452300.1	TIGR:cd04413	:

Description

No Description!

Coordinates

chr1D:-:493930115..493933447

Molecular Weight (calculated)

18135.8 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.272

Length

162 amino acids

Sequence
(BLAST)

001: MLQDQEVHAA EMERTFIAIK PDGVQRGLIS EIVSRFERKG YKLVAIKLVV PSKQFAEKHY HDLKERPFFS GLCDFLSSGP VLAMVWEGEG VIKYGRKLIG
101: ATDPSKSEPG TIRGDLAVVV GRNIIHGSDG PETAKDEIAL WFQPKELVSY TSNEEKWIYG VN

Best Arabidopsis Sequence Match ( AT4G11010.1 )
(BLAST)

001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN

Arabidopsis Description

NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.