Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 4
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G452300.1 | Wheat | cytosol | 92.41 | 45.06 |
| Zm00001d004713_P001 | Maize | endoplasmic reticulum | 88.61 | 36.65 |
| Solyc08g008340.2.1 | Tomato | plastid | 100.0 | 33.76 |
| PGSC0003DMT400014828 | Potato | mitochondrion | 96.2 | 32.76 |
| VIT_02s0025g01500.t01 | Wine grape | plastid | 96.2 | 32.34 |
| AT4G23900.1 | Thale cress | mitochondrion | 94.94 | 31.65 |
| KRH60038 | Soybean | mitochondrion | 93.67 | 31.49 |
| KRH41307 | Soybean | mitochondrion | 93.67 | 31.36 |
| CDY47613 | Canola | mitochondrion | 93.67 | 31.22 |
| GSMUA_Achr1P11560_001 | Banana | mitochondrion | 93.67 | 31.22 |
| Bra013742.1-P | Field mustard | mitochondrion | 93.67 | 31.22 |
| Zm00001d009774_P001 | Maize | mitochondrion | 93.67 | 31.09 |
| CDY25267 | Canola | plastid | 92.41 | 31.06 |
| CDX94238 | Canola | plastid | 92.41 | 31.06 |
| Bra033163.1-P | Field mustard | plastid | 92.41 | 31.06 |
| CDX86826 | Canola | mitochondrion | 92.41 | 30.93 |
| Bra035260.1-P | Field mustard | mitochondrion | 92.41 | 30.93 |
| Zm00001d039221_P001 | Maize | mitochondrion | 92.41 | 30.8 |
| GSMUA_Achr4P01100_001 | Banana | mitochondrion | 92.41 | 30.67 |
| Solyc08g082430.2.1 | Tomato | plastid | 92.41 | 30.67 |
| Os05t0595400-01 | Rice | plastid | 92.41 | 30.54 |
| KXG22725 | Sorghum | mitochondrion | 93.67 | 30.45 |
| CDY03508 | Canola | mitochondrion, plastid | 91.14 | 30.38 |
| TraesCS1A01G444300.1 | Wheat | mitochondrion, plastid | 92.41 | 30.29 |
| Solyc09g055420.1.1 | Tomato | cytosol, unclear | 44.3 | 29.91 |
| HORVU1Hr1G095400.2 | Barley | plastid | 93.67 | 29.84 |
| TraesCS1B01G478800.1 | Wheat | plastid | 92.41 | 29.44 |
| AT4G11010.1 | Thale cress | mitochondrion, plastid | 88.61 | 29.41 |
| Solyc01g089970.2.1 | Tomato | extracellular, plastid | 53.16 | 28.38 |
| Zm00001d024444_P001 | Maize | plastid | 88.61 | 24.22 |
| Solyc03g110960.2.1 | Tomato | plastid | 56.96 | 19.31 |
| Solyc06g071960.2.1 | Tomato | plastid | 54.43 | 19.2 |
| AT4G23895.3 | Thale cress | cytosol | 94.94 | 16.06 |
| Solyc12g049370.1.1 | Tomato | endoplasmic reticulum | 34.18 | 15.7 |
| CDY40857 | Canola | endoplasmic reticulum, golgi | 3.8 | 0.9 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 |
| GO:GO:0006241 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR036850 | UniProt:K4C9R2 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf |
| InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 | PANTHER:PTHR11349 |
| PANTHER:PTHR11349:SF91 | SMART:SM00562 | SUPFAM:SSF54919 | EnsemblPlantsGene:Solyc06g075470.1 | EnsemblPlants:Solyc06g075470.1.1 | UniParc:UPI0002766B77 |
Description
Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:K4C9R2]
Coordinates
chr6:-:46837015..46837254
Molecular Weight (calculated)
8815.5 Da
IEP (calculated)
5.856
GRAVY (calculated)
-0.490
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MVWEGEGVIK YGRKLIGATD PQKSEPGTIR GDLAVVVGRN IIHGSDGPET AKDEIKLWFK PEELVRYTSN AEKWIYGVN
001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN
Arabidopsis Description
NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.