CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035260.1-P	Field mustard	mitochondrion	100.0	100.0
CDX94238	Canola	plastid	96.19	96.6
CDY25267	Canola	plastid	95.76	96.17
Solyc06g075470.1.1	Tomato	cytosol	30.93	92.41
AT4G11010.1	Thale cress	mitochondrion, plastid	92.8	92.02
TraesCS1D01G452300.1	Wheat	cytosol	60.59	88.27
CDY03508	Canola	mitochondrion, plastid	84.32	83.97
CDY47613	Canola	mitochondrion	83.9	83.54
PGSC0003DMT400031997	Potato	extracellular	79.66	78.99
PGSC0003DMT400014828	Potato	mitochondrion	77.54	78.88
KRH41307	Soybean	mitochondrion	78.81	78.81
Solyc08g008340.2.1	Tomato	plastid	77.97	78.63
VIT_02s0025g01500.t01	Wine grape	plastid	77.97	78.3
Solyc08g082430.2.1	Tomato	plastid	78.81	78.15
KRH60038	Soybean	mitochondrion	77.54	77.87
GSMUA_Achr1P11560_001	Banana	mitochondrion	69.92	69.62
GSMUA_Achr4P01100_001	Banana	mitochondrion	69.92	69.33
Zm00001d039221_P001	Maize	mitochondrion	69.49	69.2
Os05t0595400-01	Rice	plastid	69.92	69.04
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	69.92	68.46
KXG22725	Sorghum	mitochondrion	70.34	68.31
Zm00001d009774_P001	Maize	mitochondrion	68.22	67.65
HORVU1Hr1G095400.2	Barley	plastid	70.34	66.94
TraesCS1B01G478800.1	Wheat	plastid	70.34	66.94
Zm00001d004713_P001	Maize	endoplasmic reticulum	50.85	62.83
CDY10545	Canola	cytosol	36.44	58.11
CDY42375	Canola	cytosol	36.02	57.43
CDX93161	Canola	cytosol	15.25	57.14
CDY13081	Canola	cytosol	35.59	56.76
CDY71669	Canola	cytosol, plasma membrane	35.59	56.76
CDY61716	Canola	cytosol	30.08	50.71
Zm00001d024444_P001	Maize	plastid	55.51	45.33
CDY41513	Canola	plastid	39.41	40.09
CDX84395	Canola	plastid	39.41	40.09
CDY48138	Canola	plastid	37.71	38.7
CDY40857	Canola	endoplasmic reticulum, golgi	45.34	31.94
CDY66964	Canola	endoplasmic reticulum	23.31	31.25
CDX96770	Canola	endoplasmic reticulum	23.31	31.07

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078DC37
EnsemblPlants:CDX86826	ProteinID:CDX86826	ProteinID:CDX86826.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00145572001
InterPro:IPR036850	HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS
PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF91	MetaCyc:PWY-6545
MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205
MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226
MetaCyc:PWY-7227	SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI0002546CE5	SEG:seg	:

Description

BnaA09g22160D

Coordinates

chrLK031847:+:1036846..1038419

Molecular Weight (calculated)

25628.7 Da

IEP (calculated)

9.748

GRAVY (calculated)

-0.114

Length

236 amino acids

Sequence
(BLAST)

001: MSSLICRSAS KAARSLLSSA KNARFFSEGR AIGAAGAVTA SAKIPLYASN FARSSSGSSK SWITGLLALP AAAYMVQEQE VLAAEMERTF IAIKPDGVQR
101: GLISEIVARF ERKGFKLVGI KVVVPSKDFA QKHYHDLKER PFFNGLCDFL SSGPVIAMVW EGEGVIRYGR KLIGATDPQK SEPGTIRGDL AVVVGRNIIH
201: GSDGPETAKD EINLWFKPQE LVSYTNNAEK WIYGDN

Best Arabidopsis Sequence Match ( AT4G11010.1 )
(BLAST)

001: MSSQICRSAS KAAKSLLSSA KNARFFSEGR AIGAAAAVSA SGKIPLYASN FARSSGSGVA SKSWITGLLA LPAAAYMIQD QEVLAAEMER TFIAIKPDGV
101: QRGLISEIIS RFERKGFKLV GIKVIVPSKD FAQKHYHDLK ERPFFNGLCD FLSSGPVIAM VWEGDGVIRY GRKLIGATDP QKSEPGTIRG DLAVTVGRNI
201: IHGSDGPETA KDEISLWFKP QELVSYTSNS EKWLYGDN

Arabidopsis Description

NDPK3Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UTZ0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.