CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030844.1-P	Field mustard	cytosol	100.0	100.0
CDY10545	Canola	cytosol	99.32	99.32
CDY71669	Canola	cytosol, plasma membrane	96.62	96.62
CDY13081	Canola	cytosol	95.95	95.95
CDY61716	Canola	cytosol	85.81	90.71
CDX93161	Canola	cytosol	37.84	88.89
KRH48835	Soybean	endoplasmic reticulum, nucleus	89.19	88.59
AT4G09320.1	Thale cress	cytosol, mitochondrion, nucleus	88.51	87.92
KRH66485	Soybean	endoplasmic reticulum	87.16	86.58
Solyc01g089970.2.1	Tomato	extracellular, plastid	83.78	83.78
PGSC0003DMT400080042	Potato	cytosol	83.78	83.78
VIT_15s0021g01330.t01	Wine grape	cytosol, extracellular	81.76	81.76
Zm00001d029968_P001	Maize	plastid	81.08	80.54
EER91919	Sorghum	cytosol	81.08	80.54
GSMUA_Achr5P18300_001	Banana	cytosol, unclear	79.73	79.73
GSMUA_Achr8P15010_001	Banana	cytosol	79.05	79.05
GSMUA_Achr11P...	Banana	cytosol	75.68	78.87
TraesCS1A01G217200.1	Wheat	golgi	77.7	76.67
TraesCS1B01G230300.1	Wheat	cytosol, plastid	77.7	76.67
TraesCS1D01G219000.1	Wheat	plastid	77.7	76.16
HORVU1Hr1G055440.1	Barley	cytosol, plasma membrane	76.35	75.33
Os10t0563700-01	Rice	extracellular	74.32	72.85
Solyc09g055420.1.1	Tomato	cytosol, unclear	56.08	70.94
EER99399	Sorghum	cytosol	71.62	70.67
Zm00001d021526_P001	Maize	cytosol, extracellular	72.3	69.93
Os07t0492000-01	Rice	extracellular	68.92	68.46
TraesCS4A01G213400.2	Wheat	unclear	70.95	54.4
TraesCS4B01G102400.2	Wheat	cytosol	70.27	53.89
TraesCS4D01G099200.2	Wheat	cytosol	69.59	53.37
KXG23408	Sorghum	plastid	27.03	50.63
CDY41513	Canola	plastid	58.78	37.5
CDX84395	Canola	plastid	58.11	37.07
CDY48138	Canola	plastid	57.43	36.96
CDX94238	Canola	plastid	58.11	36.6
CDY25267	Canola	plastid	58.11	36.6
CDX86826	Canola	mitochondrion	57.43	36.02
CDY03508	Canola	mitochondrion, plastid	57.43	35.87
CDY47613	Canola	mitochondrion	57.43	35.87
CDY66964	Canola	endoplasmic reticulum	33.78	28.41
CDX96770	Canola	endoplasmic reticulum	33.78	28.25
CDY40857	Canola	endoplasmic reticulum, golgi	29.05	12.84

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	GO:A0A078HV31
UniProt:A0A078HV31	EnsemblPlants:CDY42375	ProteinID:CDY42375	ProteinID:CDY42375.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006165
GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00074656001	InterPro:IPR036850
HAMAP:MF_00451	InterPro:NDK-like_dom	InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334
PRINTS:PR01243	ScanProsite:PS00469	PANTHER:PTHR11349	PANTHER:PTHR11349:SF66	MetaCyc:PWY-6545	MetaCyc:PWY-7176
MetaCyc:PWY-7184	MetaCyc:PWY-7187	MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210
MetaCyc:PWY-7220	MetaCyc:PWY-7221	MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227
SMART:SM00562	SUPFAM:SSF54919	UniParc:UPI0001BA6476	:	:	:

Description

BnaA08g00390DNucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A078HV31]

Coordinates

chrLK032523:-:24692..25823

Molecular Weight (calculated)

16395.8 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.049

Length

148 amino acids

Sequence
(BLAST)

001: MEQTFIMIKP DGVQRGLVGQ IICRFEQKGF TLKGLKLITV DRPFAEKHYQ DLSAKPFFSG LVDYIISGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNIIHGSDSV ESANKECALW FPDGPVNWQS SLHSWIYE

Best Arabidopsis Sequence Match ( AT4G09320.1 )
(BLAST)

001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET

Arabidopsis Description

NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.