Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71669 | Canola | cytosol, plasma membrane | 89.26 | 89.86 |
| Bra027579.1-P | Field mustard | cytosol | 88.59 | 89.19 |
| CDY10545 | Canola | cytosol | 88.59 | 89.19 |
| CDY13081 | Canola | cytosol | 88.59 | 89.19 |
| Bra030844.1-P | Field mustard | cytosol | 87.92 | 88.51 |
| CDY42375 | Canola | cytosol | 87.92 | 88.51 |
| KRH48835 | Soybean | endoplasmic reticulum, nucleus | 85.91 | 85.91 |
| VIT_15s0021g01330.t01 | Wine grape | cytosol, extracellular | 83.22 | 83.78 |
| CDY61716 | Canola | cytosol | 78.52 | 83.57 |
| KRH66485 | Soybean | endoplasmic reticulum | 83.22 | 83.22 |
| EER91919 | Sorghum | cytosol | 83.22 | 83.22 |
| Zm00001d029968_P001 | Maize | plastid | 83.22 | 83.22 |
| TraesCS1A01G217200.1 | Wheat | golgi | 83.22 | 82.67 |
| TraesCS1B01G230300.1 | Wheat | cytosol, plastid | 83.22 | 82.67 |
| TraesCS1D01G219000.1 | Wheat | plastid | 83.22 | 82.12 |
| Solyc01g089970.2.1 | Tomato | extracellular, plastid | 81.21 | 81.76 |
| PGSC0003DMT400080042 | Potato | cytosol | 81.21 | 81.76 |
| HORVU1Hr1G055440.1 | Barley | cytosol, plasma membrane | 81.88 | 81.33 |
| GSMUA_Achr5P18300_001 | Banana | cytosol, unclear | 79.87 | 80.41 |
| GSMUA_Achr11P... | Banana | cytosol | 76.51 | 80.28 |
| Os10t0563700-01 | Rice | extracellular | 80.54 | 79.47 |
| GSMUA_Achr8P15010_001 | Banana | cytosol | 77.85 | 78.38 |
| CDX93161 | Canola | cytosol | 32.21 | 76.19 |
| Bra013108.1-P | Field mustard | cytosol | 42.28 | 75.0 |
| Solyc09g055420.1.1 | Tomato | cytosol, unclear | 57.05 | 72.65 |
| EER99399 | Sorghum | cytosol | 72.48 | 72.0 |
| Zm00001d021526_P001 | Maize | cytosol, extracellular | 73.15 | 71.24 |
| Os07t0492000-01 | Rice | extracellular | 69.8 | 69.8 |
| TraesCS4B01G102400.2 | Wheat | cytosol | 70.47 | 54.4 |
| TraesCS4A01G213400.2 | Wheat | unclear | 69.8 | 53.89 |
| TraesCS4D01G099200.2 | Wheat | cytosol | 69.8 | 53.89 |
| KXG23408 | Sorghum | plastid | 24.16 | 45.57 |
| AT5G63310.1 | Thale cress | plastid | 57.05 | 36.8 |
| AT4G11010.1 | Thale cress | mitochondrion, plastid | 58.39 | 36.55 |
| AT4G23900.1 | Thale cress | mitochondrion | 57.05 | 35.87 |
| AT1G17410.1 | Thale cress | endoplasmic reticulum | 34.23 | 28.18 |
| AT4G23895.3 | Thale cress | cytosol | 57.05 | 18.2 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | PDB:1U8W | Gene3D:3.30.70.141 | MapMan:6.3.2.4 |
| EntrezGene:826515 | UniProt:A0A178UXQ6 | ProteinID:AEE82742.2 | EMBL:AF017641 | EMBL:AF370529 | ArrayExpress:AT4G09320 |
| EnsemblPlantsGene:AT4G09320 | RefSeq:AT4G09320 | TAIR:AT4G09320 | RefSeq:AT4G09320-TAIR-G | EnsemblPlants:AT4G09320.1 | TAIR:AT4G09320.1 |
| EMBL:AY072518 | ProteinID:CAA49173.1 | ProteinID:CAB55695.1 | ProteinID:CAB78055.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004550 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006139 |
| GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009117 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0046872 | GO:GO:0070301 | InterPro:IPR036850 | HAMAP:MF_00451 | InterPro:NDK-like_dom |
| InterPro:NDK-like_dom_sf | Symbol:NDPK1 | RefSeq:NP_567346.2 | InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | ProteinID:OAO97642.1 |
| UniProt:P39207 | PFAM:PF00334 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0006339 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01243 |
| ScanProsite:PS00469 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF66 | SMART:SM00562 | SUPFAM:SSF54919 | UniParc:UPI000012FE7C |
| EMBL:X69373 | EMBL:Z18791 | : | : | : | : |
Description
NDK1Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UXQ6]
Coordinates
chr4:+:5923484..5924366
Molecular Weight (calculated)
16500.8 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.065
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQTFIMIKP DGVQRGLIGE VICRFEKKGF TLKGLKLISV ERSFAEKHYE DLSSKSFFSG LVDYIVSGPV VAMIWEGKNV VLTGRKIIGA TNPAASEPGT
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
101: IRGDFAIDIG RNVIHGSDSV ESARKEIALW FPDGPVNWQS SVHPWVYET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.