Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66964 | Canola | endoplasmic reticulum | 83.98 | 86.36 |
| CDX96770 | Canola | endoplasmic reticulum | 81.22 | 83.05 |
| VIT_09s0002g00950.t01 | Wine grape | cytosol | 55.25 | 69.93 |
| TraesCS7B01G282400.1 | Wheat | cytosol | 32.04 | 69.88 |
| KRH33600 | Soybean | cytosol | 28.18 | 65.38 |
| KRH47632 | Soybean | cytosol | 41.44 | 61.98 |
| PGSC0003DMT400011148 | Potato | endoplasmic reticulum | 57.46 | 60.47 |
| Os02t0565100-01 | Rice | endoplasmic reticulum | 60.22 | 60.22 |
| Solyc12g049370.1.1 | Tomato | endoplasmic reticulum | 56.91 | 59.88 |
| GSMUA_Achr3P05930_001 | Banana | endoplasmic reticulum | 56.91 | 59.54 |
| TraesCS7A01G380500.1 | Wheat | endoplasmic reticulum | 55.8 | 56.11 |
| HORVU7Hr1G090780.4 | Barley | endoplasmic reticulum | 30.94 | 56.0 |
| Zm00001d050827_P003 | Maize | endoplasmic reticulum | 57.46 | 55.62 |
| TraesCS7D01G376900.1 | Wheat | endoplasmic reticulum | 55.25 | 55.56 |
| HORVU7Hr1G090750.2 | Barley | endoplasmic reticulum, extracellular | 40.88 | 52.48 |
| KRH06204 | Soybean | endoplasmic reticulum, extracellular | 54.7 | 46.26 |
| KXG30465 | Sorghum | plastid | 56.91 | 43.28 |
| AT4G09320.1 | Thale cress | cytosol, mitochondrion, nucleus | 28.18 | 34.23 |
| AT5G63310.1 | Thale cress | plastid | 32.04 | 25.11 |
| AT4G11010.1 | Thale cress | mitochondrion, plastid | 28.18 | 21.43 |
| AT4G23900.1 | Thale cress | mitochondrion | 27.62 | 21.1 |
| AT4G23895.3 | Thale cress | cytosol | 27.62 | 10.71 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:50.2.7 | EntrezGene:838313 |
| ProteinID:AEE29583.1 | ArrayExpress:AT1G17410 | EnsemblPlantsGene:AT1G17410 | RefSeq:AT1G17410 | TAIR:AT1G17410 | RefSeq:AT1G17410-TAIR-G |
| EnsemblPlants:AT1G17410.1 | TAIR:AT1G17410.1 | UniProt:F4I7J3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 |
| GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| InterPro:IPR036850 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf | RefSeq:NP_173184.2 | InterPro:Nucleoside_diP_kinase | PFAM:PF00334 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01243 | PANTHER:PTHR11349 | PANTHER:PTHR11349:SF64 |
| SMART:SM00562 | SUPFAM:SSF54919 | SignalP:SignalP-noTM | UniParc:UPI000034F39C | SEG:seg | : |
Description
Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
Coordinates
chr1:-:5968410..5969976
Molecular Weight (calculated)
19991.8 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.138
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.