CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33600	Soybean	cytosol	57.85	89.74
TraesCS7B01G282400.1	Wheat	cytosol	46.28	67.47
VIT_09s0002g00950.t01	Wine grape	cytosol	69.42	58.74
HORVU7Hr1G090780.4	Barley	endoplasmic reticulum	43.8	53.0
KRH06204	Soybean	endoplasmic reticulum, extracellular	83.47	47.2
Solyc12g049370.1.1	Tomato	endoplasmic reticulum	66.12	46.51
PGSC0003DMT400011148	Potato	endoplasmic reticulum	65.29	45.93
GSMUA_Achr3P05930_001	Banana	endoplasmic reticulum	64.46	45.09
CDY66964	Canola	endoplasmic reticulum	61.98	42.61
AT1G17410.1	Thale cress	endoplasmic reticulum	61.98	41.44
Os02t0565100-01	Rice	endoplasmic reticulum	61.16	40.88
TraesCS7A01G380500.1	Wheat	endoplasmic reticulum	60.33	40.56
CDX96770	Canola	endoplasmic reticulum	58.68	40.11
Zm00001d050827_P003	Maize	endoplasmic reticulum	61.98	40.11
TraesCS7D01G376900.1	Wheat	endoplasmic reticulum	59.5	40.0
KXG30465	Sorghum	plastid	63.64	32.35
HORVU7Hr1G090750.2	Barley	endoplasmic reticulum, extracellular	35.54	30.5
KRH48835	Soybean	endoplasmic reticulum, nucleus	32.23	26.17
KRH66485	Soybean	endoplasmic reticulum	30.58	24.83
KRH57193	Soybean	plastid	36.36	19.56
KRH03909	Soybean	plastid	36.36	19.38
KRH16591	Soybean	mitochondrion	29.75	18.46
KRG89746	Soybean	plastid	31.41	16.96
KRH60038	Soybean	mitochondrion	32.23	16.6
KRH41307	Soybean	mitochondrion	32.23	16.53

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	EntrezGene:100807618	Gene3D:3.30.70.141	MapMan:50.2.7
EMBL:ACUP02004156	EnsemblPlantsGene:GLYMA_07G040700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1KHD6
InterPro:IPR036850	EnsemblPlants:KRH47632	ProteinID:KRH47632	ProteinID:KRH47632.1	ProteinID:KRH47633.1	InterPro:NDK-like_dom
InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469
PANTHER:PTHR11349	PANTHER:PTHR11349:SF64	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187
MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221
MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562	SUPFAM:SSF54919
UniParc:UPI000295F744	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:3379952..3383194

Molecular Weight (calculated)

13607.3 Da

IEP (calculated)

7.728

GRAVY (calculated)

-0.297

Length

121 amino acids

Sequence
(BLAST)

001: MVSEFKRKKM VQLDEATVKF FYAEHSSKSF FSSLIKYMTS GPVLVMVLEK DNAIADWRAL MGPTDASKAK ITHPHSIRAK SGLDVEKNCV HGSDSPKSAQ
101: REIPFFFKEL SADVIAEHDE L

Best Arabidopsis Sequence Match ( AT1G17410.1 )
(BLAST)

001: MSGITYQILF LLLLASVSLS PVRCLGYGAS SEERTLAMIK PDGVSGNYTE EIKTIVVEAG FNIVKEMLTQ LDKETASAFY EEHSSRSFFP HLVTYMTSGP
101: VLVMVLEKRN AVSDWRDLIG PTDAEKAKIS HPHSIRALCG KNSQKNCVHG SDSTSSAERE IKFFFKDVVS GDIATQQHDE L

Arabidopsis Description

Nucleoside diphosphate kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I7J3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.