CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G452300.1	Wheat	cytosol	63.37	95.06
Zm00001d009774_P001	Maize	mitochondrion	92.59	94.54
Solyc06g075470.1.1	Tomato	cytosol	30.45	93.67
Zm00001d039221_P001	Maize	mitochondrion	90.53	92.83
Os05t0595400-01	Rice	plastid	80.66	82.01
TraesCS1A01G444300.1	Wheat	mitochondrion, plastid	79.01	79.67
TraesCS1B01G478800.1	Wheat	plastid	79.42	77.82
HORVU1Hr1G095400.2	Barley	plastid	79.01	77.42
VIT_02s0025g01500.t01	Wine grape	plastid	70.37	72.77
PGSC0003DMT400014828	Potato	mitochondrion	69.14	72.41
GSMUA_Achr4P01100_001	Banana	mitochondrion	70.37	71.85
Solyc08g008340.2.1	Tomato	plastid	69.14	71.79
PGSC0003DMT400031997	Potato	extracellular	69.55	71.01
Solyc08g082430.2.1	Tomato	plastid	69.55	71.01
GSMUA_Achr1P11560_001	Banana	mitochondrion	69.14	70.89
CDX94238	Canola	plastid	68.31	70.64
AT4G23900.1	Thale cress	mitochondrion	68.72	70.46
CDX86826	Canola	mitochondrion	68.31	70.34
Bra035260.1-P	Field mustard	mitochondrion	68.31	70.34
Bra033163.1-P	Field mustard	plastid	67.9	70.21
KRH60038	Soybean	mitochondrion	67.9	70.21
CDY25267	Canola	plastid	67.9	70.21
AT4G11010.1	Thale cress	mitochondrion, plastid	67.9	69.33
CDY47613	Canola	mitochondrion	66.26	67.93
Bra013742.1-P	Field mustard	mitochondrion	66.26	67.93
CDY03508	Canola	mitochondrion, plastid	66.26	67.93
KRH41307	Soybean	mitochondrion	65.84	67.8
Zm00001d004713_P001	Maize	endoplasmic reticulum	53.09	67.54
EER91919	Sorghum	cytosol	37.45	61.07
EER99399	Sorghum	cytosol	34.57	56.0
Zm00001d024444_P001	Maize	plastid	55.97	47.06
KXG23408	Sorghum	plastid	14.4	44.3
EES16135	Sorghum	plastid	38.68	42.34
AT4G23895.3	Thale cress	cytosol	68.72	35.76
CDY40857	Canola	endoplasmic reticulum, golgi	39.09	28.36
KXG30465	Sorghum	plastid	22.22	22.69

Protein Annotations

KEGG:00230+2.7.4.6	KEGG:00240+2.7.4.6	KEGG:00983+2.7.4.6	Gene3D:3.30.70.141	MapMan:6.3.2.4	UniProt:A0A1B6PBB3
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004550	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0006165	GO:GO:0006183	GO:GO:0006228	GO:GO:0006241	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR036850	EnsemblPlants:KXG22725	ProteinID:KXG22725	ProteinID:KXG22725.1	HAMAP:MF_00451	InterPro:NDK-like_dom
InterPro:NDK-like_dom_sf	InterPro:Nucleoside_diP_kinase	InterPro:Nucleoside_diP_kinase_AS	PFAM:PF00334	PRINTS:PR01243	ScanProsite:PS00469
PANTHER:PTHR11349	PANTHER:PTHR11349:SF91	MetaCyc:PWY-6545	MetaCyc:PWY-7176	MetaCyc:PWY-7184	MetaCyc:PWY-7187
MetaCyc:PWY-7197	MetaCyc:PWY-7198	MetaCyc:PWY-7205	MetaCyc:PWY-7210	MetaCyc:PWY-7220	MetaCyc:PWY-7221
MetaCyc:PWY-7222	MetaCyc:PWY-7224	MetaCyc:PWY-7226	MetaCyc:PWY-7227	SMART:SM00562	EnsemblPlantsGene:SORBI_3009G259200
SUPFAM:SSF54919	UniParc:UPI0001FCCE11	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:59268214..59273174

Molecular Weight (calculated)

26463.7 Da

IEP (calculated)

9.428

GRAVY (calculated)

-0.160

Length

243 amino acids

Sequence
(BLAST)

001: MSAAASKKLF QAARSLILSA SQRSSAAAVL AAEGRTAALA TLTNFGRKAL PTAYYSYHRQ GSHHAASGWG AIAAAVPAAV YMLQDQEAHA AEMERTFIAI
101: KPDGVQRGLI SEIVNRFERK GYKLVAIKLI VPSKEFAQKH YHDLKERPFF NGLCDFLSSG PVLAMVWEGE GVIKYGRKLI GATDPQKSEP GTIRGDLAVV
201: VGRNIIHGSD GPETAKDEIA LWFEPKELVS YTSNEEKWIY GVN

Best Arabidopsis Sequence Match ( AT4G23900.1 )
(BLAST)

001: MSSQICRSAS RAARSLLSSA KNARFFSEGR AIGAASVVHA TGKVPQYASN FGKSGSGFVS NSWITGLLAL PAAAFMLQDQ EALAAEMERT FIAIKPDGVQ
101: RGLISEIITR FERKGYKLVG IKVMVPSKGF AQKHYHDLKE RPFFNGLCNF LSSGPVVAMV WEGEGVIRYG RKLIGATDPQ KSEPGTIRGD LAVVVGRNII
201: HGSDGPETAK DEISLWFKPE ELVSYTSNAE KWIYGQN

Arabidopsis Description

NDK4Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8LAH8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.