Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G104600.2 | Wheat | plastid | 86.29 | 97.27 |
| TraesCS5A01G092400.1 | Wheat | plastid | 86.29 | 96.83 |
| EES16135 | Sorghum | plastid | 75.0 | 83.78 |
| Os12t0548300-01 | Rice | plastid | 72.58 | 81.82 |
| Zm00001d023833_P001 | Maize | plastid | 73.39 | 76.79 |
| PGSC0003DMT400039453 | Potato | cytosol | 47.98 | 73.01 |
| TraesCS5B01G098300.2 | Wheat | cytosol | 50.0 | 72.09 |
| HORVU1Hr1G055440.1 | Barley | cytosol, plasma membrane | 40.32 | 66.67 |
| PGSC0003DMT400069352 | Potato | mitochondrion | 58.87 | 65.18 |
| Solyc06g071960.2.1 | Tomato | plastid | 58.47 | 64.73 |
| VIT_17s0000g10280.t01 | Wine grape | plastid | 59.68 | 64.35 |
| GSMUA_AchrUn_... | Banana | plastid | 59.68 | 63.25 |
| KRH57193 | Soybean | plastid | 56.85 | 62.67 |
| Solyc03g110960.2.1 | Tomato | plastid | 58.87 | 62.66 |
| KRH03909 | Soybean | plastid | 56.45 | 61.67 |
| KRH16591 | Soybean | mitochondrion | 46.37 | 58.97 |
| AT5G63310.1 | Thale cress | plastid | 54.03 | 58.01 |
| CDY41513 | Canola | plastid | 53.63 | 57.33 |
| Bra038621.1-P | Field mustard | plastid | 53.63 | 57.33 |
| CDX84395 | Canola | plastid | 53.23 | 56.9 |
| CDY48138 | Canola | plastid | 50.81 | 54.78 |
| KRG89746 | Soybean | plastid | 47.18 | 52.23 |
| HORVU1Hr1G095400.2 | Barley | plastid | 37.1 | 37.1 |
| HORVU7Hr1G090780.4 | Barley | endoplasmic reticulum | 12.5 | 31.0 |
| HORVU7Hr1G090750.2 | Barley | endoplasmic reticulum, extracellular | 14.92 | 26.24 |
Protein Annotations
| KEGG:00230+2.7.4.6 | KEGG:00240+2.7.4.6 | KEGG:00983+2.7.4.6 | Gene3D:3.30.70.141 | MapMan:6.3.2.4 | UniProt:A0A287QPL9 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004550 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006139 | GO:GO:0006165 | GO:GO:0006183 | GO:GO:0006228 | GO:GO:0006241 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| EnsemblPlantsGene:HORVU5Hr1G024250 | EnsemblPlants:HORVU5Hr1G024250.1 | InterPro:IPR036850 | HAMAP:MF_00451 | InterPro:NDK-like_dom | InterPro:NDK-like_dom_sf |
| InterPro:Nucleoside_diP_kinase | InterPro:Nucleoside_diP_kinase_AS | PFAM:PF00334 | PRINTS:PR01243 | ScanProsite:PS00469 | PANTHER:PTHR11349 |
| PANTHER:PTHR11349:SF44 | SMART:SM00562 | SUPFAM:SSF54919 | UniParc:UPI000B482BA6 | SEG:seg | : |
Description
Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:A0A287QPL9]
Coordinates
chrchr5H:+:130542486..130546601
Molecular Weight (calculated)
27161.7 Da
IEP (calculated)
10.193
GRAVY (calculated)
-0.232
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: QAAAQRHLLP IQKCACFLCR VCTELRREMD AMAALARTGP SLAAASHRSS ATFRPSASLS FAAASSRNRG RVGLSTAGWN RRATRVARAT PNRIVASSEV
101: EQTYIMIKPD GVQRGLVGEI ISRFEKKGFL LKGLKLFQCP KDLAQEHYKD LKERPFFPNL IDYITSGPVV CMAWEGAGVV ASARKLIGAT NPLQAEPGTI
201: RGDLAVQTGR NVVHGSDSPD NGKREIALWF KEGELAQWES VQTPWLIE
101: EQTYIMIKPD GVQRGLVGEI ISRFEKKGFL LKGLKLFQCP KDLAQEHYKD LKERPFFPNL IDYITSGPVV CMAWEGAGVV ASARKLIGAT NPLQAEPGTI
201: RGDLAVQTGR NVVHGSDSPD NGKREIALWF KEGELAQWES VQTPWLIE
001: MVGATVVSKW TPLCVASPPE RNSASLNPHC SPARVNFRTA LAAFRPQFRL FSRNSASRRR LRASSSAESG IFLPHLVASM EDVEETYIMV KPDGIQRGLV
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E
101: GEIISRFEKK GFKLIGLKMF QCPKELAEEH YKDLSAKSFF PNLIEYITSG PVVCMAWEGV GVVASARKLI GKTDPLQAEP GTIRGDLAVQ TGRNIVHGSD
201: SPENGKREIG LWFKEGELCK WDSALATWLR E
Arabidopsis Description
NDPK2Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL;Acc:Q0WUG9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.