CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028949_P001	Maize	cytosol, mitochondrion	96.44	96.44
Os03t0319400-01	Rice	mitochondrion	92.43	92.43
TraesCS4D01G179700.2	Wheat	mitochondrion	88.64	88.64
TraesCS4B01G178100.1	Wheat	mitochondrion	88.64	88.64
HORVU4Hr1G052200.2	Barley	mitochondrion	88.42	88.42
TraesCS4A01G126800.3	Wheat	mitochondrion	88.64	88.25
KXG37001	Sorghum	cytosol, mitochondrion	79.29	79.46
EES16537	Sorghum	cytosol	66.59	74.19
OQU82814	Sorghum	cytosol	72.38	73.86
EER92947	Sorghum	cytosol, plastid	62.58	62.86
OQU88438	Sorghum	cytosol, mitochondrion	59.91	62.41
EER90021	Sorghum	cytosol	54.79	54.79
KXG32670	Sorghum	cytosol	53.45	52.86
EER97615	Sorghum	cytosol	46.33	46.85
OQU77359	Sorghum	cytosol, mitochondrion	46.33	45.12
EES00612	Sorghum	cytosol	45.88	44.49
EES19859	Sorghum	cytosol	35.19	31.35
EES01406	Sorghum	cytosol	34.74	31.26
KXG39612	Sorghum	cytosol	34.97	30.6

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.5.3	Gene3D:3.30.200.20	Gene3D:3.30.310.80	EntrezGene:8055912	UniProt:C4P7S0	ncoils:Coil
EnsemblPlants:EER92350	ProteinID:EER92350	ProteinID:EER92350.1	EMBL:FJ901199	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR018451
InterPro:Kinase-like_dom_sf	InterPro:NAF/FISL_domain	InterPro:NAF_dom	PFAM:PF00069	PFAM:PF03822	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50816	PANTHER:PTHR24343	PANTHER:PTHR24343:SF185
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G390200	SUPFAM:SSF56112	unigene:Sbi.21644
unigene:Sbi.4208	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A42013	RefSeq:XP_002465352.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:67661086..67666658

Molecular Weight (calculated)

50863.1 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.422

Length

449 amino acids

Sequence
(BLAST)

001: MYRAKRAALS PKVKRRVGKY ELGRTIGEGT FAKVRFARNT ENQEPVAIKI LDKEKVQKRR LVEQIKREIC TMKLVRHPNV VRLFEVMGSK AKIFIVLEYV
101: TGGELFEIIA TNGRLKEDEA RKYFQQLINA VDYCHSRGVY HRDLKLENLL LDGAGNLKVS DFGLSALTEQ VKADGLLHTT CGTPNYVAPE VIEDGGYDGA
201: TADVWSCGVI LFVLLAGYLP FEDDNIIALY KKISEAQFSC PSWFSAGAKN LITRILDPNP TTRITISQIL EHPWFKRGYK PPLFDEKYQT SLDDVDAAFG
301: DSEDQHVQEE TEDQPTSMNA FELISLNQAL NLENLFEAKE EYKRETRFTS QCPPKEIITK IEEAAKPLGF DVQKKKYKMR MENPKAGRKG NLNVATEVFQ
401: IAPSLHVVEL KKAKGDTLEF QKFYRSLSTQ LKDVVWKCDG EVKGNSTAA

Best Arabidopsis Sequence Match ( AT2G26980.4 )
(BLAST)

001: MLIPNKKLRE MNRRQQVKRR VGKYEVGRTI GEGTFAKVKF ARNSETGEPV ALKILDKEKV LKHKMAEQIR REIATMKLIK HPNVVQLYEV MASKTKIFII
101: LEYVTGGELF DKIVNDGRMK EDEARRYFQQ LIHAVDYCHS RGVYHRDLKP ENLLLDSYGN LKISDFGLSA LSQQVRDDGL LHTSCGTPNY VAPEVLNDRG
201: YDGATADMWS CGVVLYVLLA GYLPFDDSNL MNLYKKISSG EFNCPPWLSL GAMKLITRIL DPNPMTRVTP QEVFEDEWFK KDYKPPVFEE RDDSNMDDID
301: AVFKDSEEHL VTEKREEQPA AINAFEIISM SRGLNLENLF DPEQEFKRET RITLRGGANE IIEKIEEAAK PLGFDVQKKN YKMRLENVKA GRKGNLNVAT
401: EIFQVAPSLH MVQVSKSKGD TLEFHKFYKK LSNSLEQVVW TNNEVKKETA K

Arabidopsis Description

CIPK3Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F4IVM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.