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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER88899
EER93064
EER96652
EER98550
EER98690
EER98873
EES05120
EES12026
EES12241
EES14968
EES15016
KXG25821
KXG26065
KXG30464
KXG30742
KXG33717
KXG37739
KXG39393
KXG40392
OQU76080
OQU77880
OQU82027
OQU89260
OQU90452

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G29160.1 KXG33717 AT1G07310.1 21798944
AT3G29160.1 EER93064 AT1G09020.1 17028154
AT3G29160.1 EER93064 AT1G09020.1 21558384
AT3G29160.1 EER98690 AT1G25470.1 21798944
AT3G29160.1 OQU89260 AT1G25470.1 21798944
AT3G29160.1 EER88899 AT1G51600.1 21798944
AT3G29160.1 EER96652 AT1G78020.1 21798944
AT3G29160.1 EES14968 AT1G78020.1 21798944
AT3G29160.1 KXG30742 AT1G78020.1 21798944
AT3G29160.1 OQU76080 AT1G78020.1 21798944
AT3G29160.1 EER98550 AT2G23290.1 21798944
AT3G29160.1 EES12241 AT3G14180.1 21798944
AT3G29160.1 KXG30464 AT3G14180.1 21798944
AT3G29160.1 EER98873 AT3G17860.1 21798944
AT3G29160.1 EES15016 AT3G17860.1 21798944
AT3G29160.1 KXG37739 AT3G45240.1 19339507
AT3G29160.1 OQU82027 AT3G45240.1 19339507
AT3G29160.1 KXG26065 AT3G48530.1 10417704
AT3G29160.1 EES05120 AT3G48550.1 21798944
AT3G29160.1 EES12026 AT3G48550.1 21798944
AT3G29160.1 KXG40392 AT3G52180.1 12148529
AT3G29160.1 KXG39393 AT4G15730.1 21798944
AT3G29160.1 OQU77880 AT4G15730.1 21798944
AT3G29160.1 OQU90452 AT4G15730.1 21798944
AT3G29160.1 KXG25821 AT4G15900.1 10220464
AT3G29160.1 KXG37739 AT5G60550.1 19339507
AT3G29160.1 OQU82027 AT5G60550.1 19339507
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005108_P003 Maize cytosol 96.19 95.43
TraesCS3D01G282800.1 Wheat cytosol 88.18 87.48
TraesCS3A01G282800.1 Wheat cytosol 88.18 87.48
TraesCS3B01G316500.1 Wheat cytosol 87.98 87.28
EES19859 Sorghum cytosol 87.58 86.71
KRH01228 Soybean cytosol, nucleus 80.96 78.6
KRH44934 Soybean cytosol, endoplasmic reticulum, nucleus 79.76 78.04
GSMUA_AchrUn_... Banana cytosol, plasma membrane 71.14 77.51
VIT_14s0108g01230.t01 Wine grape cytosol 79.16 76.85
Bra039146.1-P Field mustard cytosol 77.56 76.48
CDY37545 Canola cytosol 77.56 76.48
HORVU3Hr1G069190.1 Barley cytosol, plastid 87.37 76.36
KRH18445 Soybean cytosol, endoplasmic reticulum 78.76 76.31
CDY43267 Canola cytosol 77.35 76.28
CDY34697 Canola cytosol 77.56 75.73
CDY55800 Canola cytosol 77.56 75.73
Bra025379.1-P Field mustard cytosol 75.15 73.24
CDX86386 Canola cytosol 75.15 73.1
KXG39612 Sorghum cytosol 74.95 72.9
CDX85250 Canola cytosol 74.75 72.85
AT3G01090.2 Thale cress cytosol 77.96 72.71
CDY44405 Canola cytosol 74.75 72.71
AT3G29160.1 Thale cress cytosol 74.55 72.66
CDY04058 Canola cytosol 73.95 72.64
CDX74283 Canola cytosol 72.34 72.06
Bra033088.1-P Field mustard cytosol 70.54 71.69
Solyc03g115700.2.1 Tomato cytosol, nucleus 67.74 67.06
PGSC0003DMT400063153 Potato cytosol 66.93 66.27
GSMUA_Achr10P... Banana cytosol 79.56 64.03
Bra021482.1-P Field mustard cytosol 69.74 54.55
EER97615 Sorghum cytosol 32.06 36.04
EES00612 Sorghum cytosol 33.27 35.85
OQU82814 Sorghum cytosol 31.06 35.23
EER92947 Sorghum cytosol, plastid 31.46 35.12
EER92350 Sorghum cytosol, mitochondrion 31.26 34.74
KXG37001 Sorghum cytosol, mitochondrion 31.06 34.6
OQU77359 Sorghum cytosol, mitochondrion 31.86 34.49
EES16537 Sorghum cytosol 27.25 33.75
OQU88438 Sorghum cytosol, mitochondrion 29.06 33.64
KXG32670 Sorghum cytosol 30.46 33.48
EER90021 Sorghum cytosol 29.26 32.52
CDX91963 Canola plasma membrane 73.15 29.44
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.5.1.1MapMan:27.3.1.1Gene3D:3.30.310.80EntrezGene:8062118UniProt:C5XJ05EnsemblPlants:EES01406
ProteinID:EES01406ProteinID:EES01406.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:IPR001772InterPro:IPR015940InterPro:KA1/Ssp2_C
InterPro:KA1_domInterPro:Kinase-like_dom_sfProteinID:OQU87461.1PFAM:PF00069PFAM:PF02149PIRSF:PIRSF000615
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS50030PFscan:PS50032PANTHER:PTHR24343
PANTHER:PTHR24343:SF156InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3003G284000SUPFAM:SSF103243
SUPFAM:SSF56112unigene:Sbi.12894InterPro:Ser/Thr_kinase_ASInterPro:UBAUniParc:UPI0001A848A3RefSeq:XP_002456286.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:61800005..61805652
Molecular Weight (calculated)
57159.4 Da
IEP (calculated)
8.773
GRAVY (calculated)
-0.327
Length
499 amino acids
Sequence
(BLAST)
001: MEGTGKDGNP LRNYRIGKTL GIGSFGKVKI AEHISTGHKV AIKILNRRKI RGMEMEEKVK REIKILRLFM HPHIIRLYEV IDTAADIYVV MEYVKSGELF
101: DYIVEKGRLQ EEEARRFFQQ IISGVEYCHR NMVVHRDLKP ENLLLDSKCN VKIADFGLSN VMRDGHFLKT SCGSPNYAAP EVISGKLYAG PEVDVWSCGV
201: ILYALLCGTL PFDDENIPNL FKKIKGGIYT LPSHLSGAAR DLIPRMLVVD PMKRITIREI REHDWFKIHL PRYLTVPPPD SAQQVKKIDE ETLREVIGMG
301: YDKNLLVESI QNRLQNEATV AYYLLLDNRL RTTSGYLGAE CQEAMDSSFS NIASYETPSS ARGNRQQIFM ESPVGLRPHF PAERKWALGL QSRAHPREIM
401: TEVLKALQEL NVYWKKIGHY NMKCRWSPGF PGQIHNNHNY SAESIETDGQ SEKLNLVKFE IQLYKTRDEK YLLDLQRVSG PQLLFLDLCA AFLAQLRVL
Best Arabidopsis Sequence Match ( AT3G01090.2 )
(BLAST)
001: MFKRVDEFNL VSSTIDHRIF KSRMDGSGTG SRSGVESILP NYKLGRTLGI GSFGRVKIAE HALTGHKVAI KILNRRKIKN MEMEEKVRRE IKILRLFMHP
101: HIIRLYEVIE TPTDIYLVME YVNSGELFDY IVEKGRLQED EARNFFQQII SGVEYCHRNM VVHRDLKPEN LLLDSKCNVK IADFGLSNIM RDGHFLKTSC
201: GSPNYAAPEV ISGKLYAGPE VDVWSCGVIL YALLCGTLPF DDENIPNLFK KIKGGIYTLP SHLSPGARDL IPRMLVVDPM KRVTIPEIRQ HPWFQAHLPR
301: YLAVPPPDTV QQAKKIDEEI LQEVINMGFD RNHLIESLRN RTQNDGTVTY YLILDNRFRA SSGYLGAEFQ ETMEGTPRMH PAESVASPVS HRLPGLMEYQ
401: GVGLRSQYPV ERKWALGLQS RAHPREIMTE VLKALQDLNV CWKKIGHYNM KCRWVPNSSA DGMLSNSMHD NNYFGDESSI IENEAAVKSP NVVKFEIQLY
501: KTRDDKYLLD LQRVQGPQFL FLDLCAAFLA QLRVL
Arabidopsis Description
KIN10SNF1-related protein kinase catalytic subunit alpha KIN10 [Source:UniProtKB/Swiss-Prot;Acc:Q38997]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.