CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES13033

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07310.1	EES13033	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012336_P001	Maize	mitochondrion	71.24	84.1
Os01t0853800-01	Rice	plastid	65.54	77.37
TraesCS3A01G367800.1	Wheat	plastid	64.77	68.12
HORVU3Hr1G085130.1	Barley	plastid	63.99	67.12
TraesCS3B01G399500.1	Wheat	plastid	63.47	66.58
TraesCS3D01G360800.1	Wheat	plastid	63.47	64.3
KRH31112	Soybean	cytosol	30.31	48.95
GSMUA_Achr10P...	Banana	cytosol	41.45	48.48
KRG97773	Soybean	cytosol	34.72	44.82
VIT_06s0004g06150.t01	Wine grape	cytosol	36.53	44.76
PGSC0003DMT400015573	Potato	cytosol	35.49	42.41
Solyc09g082950.1.1	Tomato	cytosol	35.23	41.98
VIT_13s0019g03420.t01	Wine grape	cytosol	28.5	41.2
EES15243	Sorghum	cytosol, peroxisome, plastid	28.5	37.93
CDY10267	Canola	cytosol	30.05	36.48
CDY06697	Canola	cytosol	29.27	35.42
Bra015573.1-P	Field mustard	cytosol	29.02	35.11
CDY09924	Canola	cytosol	29.27	34.04
AT1G07310.1	Thale cress	cytosol	30.57	33.52
EER98534	Sorghum	cytosol	28.76	33.43
CDY06250	Canola	cytosol	29.02	32.46
Bra031570.1-P	Field mustard	cytosol	29.02	32.46

Protein Annotations

EnsemblPlants:KXG33717	EnsemblPlantsGene:SORBI_3003G359900	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF19	PFAM:PF00168	PRINTS:PR01217	ProteinID:KXG33717
ProteinID:KXG33717.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI00081AD0DB	UniProt:A0A1B6Q736
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:67718512..67723031

Molecular Weight (calculated)

41676.1 Da

IEP (calculated)

9.910

GRAVY (calculated)

-0.744

Length

386 amino acids

Sequence
(BLAST)

001: MGPALKSSWL RACSRYLGML GRGTIRQSSP TLALTHPATR PACKSANCHP LPRRRAMASP SPSSPLHPHQ HQHQHPPPPN PHHQFQSPPP SMPPPPSAAL
101: PKAFDLEVTV VSGKHLKNVN WRRGDLRAYA VVYLDPSRRA ATRPDDGGGC KPTWNERLVL PLPPHLSPHD PSILLSLDVF HSKPSDSPKP LVGSARSPLR
201: DLLYPANPNP SHDPAASALV SLPLLRPSGR PQGKIRVRVA IRERSPPPPE PQYPPPSSSP YYFPPPPPAY SAPPQYGSDQ YYRPSGYYSA PAPPPPQYEY
301: TGGPSAPVDY NRQYEQRGRT GGGGSGSGNG RYGVGTGLAV GAVAGALGGL AIDEAVKYKE EKAAERVEEK VVPAGRDDYS EYRGDY

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.