CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH28782
KRH28783
KRH69800
KRH69802
KRH76672

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07310.1	KRH28782	AT3G51180.1	21798944
AT1G07310.1	KRH28783	AT3G51180.1	21798944
AT1G07310.1	KRH69800	AT3G51180.1	21798944
AT1G07310.1	KRH69802	AT3G51180.1	21798944
AT1G07310.1	KRH76672	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97773	Soybean	cytosol	87.03	69.57
PGSC0003DMT400015573	Potato	cytosol	60.25	44.58
Solyc09g082950.1.1	Tomato	cytosol	60.25	44.44
VIT_13s0019g03420.t01	Wine grape	cytosol	47.28	42.32
GSMUA_Achr10P...	Banana	cytosol	56.07	40.61
Zm00001d012336_P001	Maize	mitochondrion	48.95	35.78
Os01t0853800-01	Rice	plastid	46.44	33.95
TraesCS3A01G367800.1	Wheat	plastid	48.95	31.88
HORVU3Hr1G085130.1	Barley	plastid	48.54	31.52
TraesCS3B01G399500.1	Wheat	plastid	47.7	30.98
TraesCS3D01G360800.1	Wheat	plastid	48.95	30.71
KXG33717	Sorghum	mitochondrion	48.95	30.31
CDY10267	Canola	cytosol	39.33	29.56
CDY06697	Canola	cytosol	38.91	29.15
CDY09924	Canola	cytosol	40.17	28.92
Bra015573.1-P	Field mustard	cytosol	37.24	27.9
AT1G07310.1	Thale cress	cytosol	41.0	27.84
CDY06250	Canola	cytosol	38.91	26.96
Bra031570.1-P	Field mustard	cytosol	38.91	26.96
KRH38406	Soybean	nucleus	30.96	26.33
KRH08884	Soybean	cytosol	26.78	25.0
KRH08885	Soybean	cytosol	23.85	23.85

Protein Annotations

EMBL:ACUP02007122	EnsemblPlants:KRH31112	EnsemblPlantsGene:GLYMA_11G227500	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF19	PFAM:PF00168	PFscan:PS50004
ProteinID:KRH31112	ProteinID:KRH31112.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0006ED5347
UniProt:A0A0R0HUJ3	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:32233853..32234699

Molecular Weight (calculated)

26158.5 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.626

Length

239 amino acids

Sequence
(BLAST)

001: MASSRPPPSK SVDLDLTIVS AKHLKNVNWK NGDLKPYVVF WVDPERRLAT KSDDSGNTSP VWNERFALPL PLPLHDSFLT LEIFHSKPSD TPKPLVANLR
101: LPLKDLHDST RSRKGYTPSH SPSPPASPYT SYTSYTDSYS NYYPAYYSGA PPPPPPRPFF DRYAGPSGPS APLDYSSTYD PMPKPPKMGL GAGLAIGAVA
201: GALGGLALDE GLNYEEDKIA ERVENDVAAA ARDDYSDYR

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.