Factsheet for Solyc09g082950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g038790.1.1
Solyc02g084080.1.1
Solyc02g084110.1.1
Solyc02g084160.1.1
Solyc02g084200.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07310.1	Solyc02g038790.1.1	AT3G51180.1	21798944
AT1G07310.1	Solyc02g084080.1.1	AT3G51180.1	21798944
AT1G07310.1	Solyc02g084110.1.1	AT3G51180.1	21798944
AT1G07310.1	Solyc02g084160.1.1	AT3G51180.1	21798944
AT1G07310.1	Solyc02g084200.1.1	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015573	Potato	cytosol	90.43	90.71
KRH31112	Soybean	cytosol	44.44	60.25
VIT_13s0019g03420.t01	Wine grape	cytosol	45.99	55.81
KRG97773	Soybean	cytosol	50.62	54.85
GSMUA_Achr10P...	Banana	cytosol	48.77	47.88
Zm00001d012336_P001	Maize	mitochondrion	41.36	40.98
Os01t0853800-01	Rice	plastid	41.36	40.98
HORVU3Hr1G085130.1	Barley	plastid	41.98	36.96
TraesCS3A01G367800.1	Wheat	plastid	41.05	36.24
TraesCS3B01G399500.1	Wheat	plastid	41.05	36.14
Bra015573.1-P	Field mustard	cytosol	35.19	35.74
CDY10267	Canola	cytosol	34.88	35.53
CDY06697	Canola	cytosol	34.88	35.42
KXG33717	Sorghum	mitochondrion	41.98	35.23
TraesCS3D01G360800.1	Wheat	plastid	41.36	35.17
Solyc06g036110.1.1	Tomato	cytosol, extracellular	26.23	34.27
CDY09924	Canola	cytosol	34.88	34.04
AT1G07310.1	Thale cress	cytosol	36.73	33.81
Bra031570.1-P	Field mustard	cytosol	33.64	31.59
CDY06250	Canola	cytosol	33.02	31.01
Solyc03g025340.1.1	Tomato	cytosol	29.94	27.79

Protein Annotations

EnsemblPlants:Solyc09g082950.1.1	EnsemblPlantsGene:Solyc09g082950.1	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF19	PFAM:PF00168	PFscan:PS50004	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000276C524	UniProt:K4CVS1	MapMan:35.2	:

Description

No Description!

Coordinates

chr9:+:68636961..68637935

Molecular Weight (calculated)

35911.1 Da

IEP (calculated)

9.149

GRAVY (calculated)

-0.737

Length

324 amino acids

Sequence
(BLAST)

001: MATGSSSRPP QKTYDLEITI VSAKHLKNVN WHHGDLKPYV IFWVDPDQRR ATQADDSGNT RPVWNERFVL HLPQSQSPPH DAVLTLEVFH SKPSETPKPL
101: VGTLRVPLKE LVNVDDFNKI RTFELRRPSG RPHGKIRLKL AIRELSPPLD YQIPPPCSYY YSTAPPPPPP SYRAFPSSPY PSHPHPPPSP VVAPPPPASP
201: SPPPPPPQQH SFPYSGFADP YSSYFPGYYS QPPPPPRPFV ERQSSYNSLG SRPSAPVDYY PPYDQKRSGK MGTGLGTGLA VGAVAGTLGG LTLGEGLKYE
301: EAKIAERVEN NIATRDDYSN YSEY

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.