Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026228 | Potato | cytosol | 91.4 | 90.88 |
| Solyc06g036110.1.1 | Tomato | cytosol, extracellular | 43.27 | 60.89 |
| CDX87149 | Canola | cytosol | 36.1 | 58.88 |
| CDY16874 | Canola | cytosol | 36.39 | 57.99 |
| HORVU6Hr1G020740.1 | Barley | cytosol | 22.64 | 56.83 |
| VIT_16s0050g01310.t01 | Wine grape | cytosol | 42.12 | 54.85 |
| Bra026474.1-P | Field mustard | cytosol | 39.54 | 53.28 |
| GSMUA_Achr10P... | Banana | cytosol | 33.24 | 53.21 |
| VIT_16s0050g01300.t01 | Wine grape | cytosol | 40.69 | 52.99 |
| HORVU6Hr1G020750.2 | Barley | cytosol | 41.55 | 51.79 |
| TraesCS6D01G104000.1 | Wheat | cytosol | 42.41 | 51.21 |
| TraesCS6B01G143000.1 | Wheat | cytosol | 42.98 | 50.85 |
| VIT_16s0050g00850.t01 | Wine grape | cytosol | 41.26 | 50.35 |
| GSMUA_Achr11P... | Banana | cytosol | 9.74 | 50.0 |
| KRH38406 | Soybean | nucleus | 39.83 | 49.47 |
| Os08t0562600-03 | Rice | plastid | 40.97 | 49.14 |
| TraesCS6A01G115400.1 | Wheat | cytosol | 42.12 | 49.0 |
| KRH08884 | Soybean | cytosol | 34.38 | 46.88 |
| Os09t0571200-01 | Rice | cytosol | 38.4 | 46.21 |
| TraesCS4D01G001900.1 | Wheat | cytosol | 42.41 | 45.68 |
| Zm00001d031892_P001 | Maize | cytosol | 36.39 | 45.04 |
| TraesCS4A01G312300.1 | Wheat | cytosol | 41.83 | 44.38 |
| AT5G23950.2 | Thale cress | cytosol | 29.8 | 44.26 |
| EES15243 | Sorghum | cytosol, peroxisome, plastid | 36.39 | 43.79 |
| TraesCS4B01G001000.1 | Wheat | cytosol | 42.69 | 42.94 |
| TraesCS7B01G436800.1 | Wheat | cytosol | 35.82 | 42.81 |
| Zm00001d005315_P001 | Maize | cytosol, extracellular | 40.4 | 42.6 |
| HORVU4Hr1G000850.1 | Barley | cytosol | 39.26 | 42.02 |
| TraesCS7A01G520000.1 | Wheat | cytosol | 37.54 | 41.85 |
| TraesCS7B01G436400.1 | Wheat | cytosol | 38.4 | 41.49 |
| Zm00001d019750_P001 | Maize | cytosol | 38.4 | 41.36 |
| TraesCS7D01G509700.1 | Wheat | cytosol | 38.11 | 40.67 |
| KRH08885 | Soybean | cytosol | 27.79 | 40.59 |
| EER98534 | Sorghum | cytosol | 36.96 | 38.86 |
| Solyc09g082950.1.1 | Tomato | cytosol | 27.79 | 29.94 |
Protein Annotations
| EnsemblPlants:Solyc03g025340.1.1 | EnsemblPlantsGene:Solyc03g025340.1 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF17 | PFAM:PF00168 | PFscan:PS50004 | SEG:seg |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002768ACA | UniProt:K4BF07 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3:-:2773022..2774071
Molecular Weight (calculated)
36408.1 Da
IEP (calculated)
5.040
GRAVY (calculated)
-0.683
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFEVEVK ISSARDLKNV NWRYGRLKPY AVVWVDPKGK CSTKVDDNGD TSPSWNEKLV IPLYAPIEES TLYIDVVHAN ATEGTKPLIG SAKLPLREVV
101: DSVGIGNLTE RSLDLKRPSG RPHGKVKIEV AVRDPRYRAP DPYYAPPYGV PPPAGSRDYP APPQPYGGSY GAPAPAPSPY GAPAPGASPY AAPPAGYPYN
201: AAPAPGPASG YGQQPGYGGA PAPGYGQQPG YGAPPAPYGQ QGSYGQQPGY PQQGSYGSQG SYGQQGSYGA QPQGSYGSQK AGYGYEEKKK SKFGGMGLGA
301: GLAMGAVAGA LGGLAISEGI DHIEDNIAEK AAEKVEDDLD DGGYDDDDY
101: DSVGIGNLTE RSLDLKRPSG RPHGKVKIEV AVRDPRYRAP DPYYAPPYGV PPPAGSRDYP APPQPYGGSY GAPAPAPSPY GAPAPGASPY AAPPAGYPYN
201: AAPAPGPASG YGQQPGYGGA PAPGYGQQPG YGAPPAPYGQ QGSYGQQPGY PQQGSYGSQG SYGQQGSYGA QPQGSYGSQK AGYGYEEKKK SKFGGMGLGA
301: GLAMGAVAGA LGGLAISEGI DHIEDNIAEK AAEKVEDDLD DGGYDDDDY
001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.