CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16874	Canola	cytosol	90.19	88.13
Bra026474.1-P	Field mustard	cytosol	86.45	71.43
AT5G23950.2	Thale cress	cytosol	71.5	65.11
Solyc06g036110.1.1	Tomato	cytosol, extracellular	59.81	51.61
HORVU6Hr1G020740.1	Barley	cytosol	32.24	49.64
GSMUA_Achr10P...	Banana	cytosol	48.6	47.71
KRH08884	Soybean	cytosol	57.01	47.66
PGSC0003DMT400076930	Potato	cytosol	59.81	47.41
KRH38406	Soybean	nucleus	62.15	47.33
VIT_16s0050g01310.t01	Wine grape	cytosol	55.14	44.03
VIT_16s0050g01300.t01	Wine grape	cytosol	53.74	42.91
HORVU6Hr1G020750.2	Barley	cytosol	55.14	42.14
TraesCS6D01G104000.1	Wheat	cytosol	56.07	41.52
GSMUA_Achr11P...	Banana	cytosol	13.08	41.18
VIT_16s0050g00850.t01	Wine grape	cytosol	54.21	40.56
TraesCS6B01G143000.1	Wheat	cytosol	55.61	40.34
Os08t0562600-03	Rice	plastid	54.67	40.21
KRH08885	Soybean	cytosol	44.39	39.75
Zm00001d031892_P001	Maize	cytosol	52.34	39.72
TraesCS6A01G115400.1	Wheat	cytosol	55.14	39.33
Os09t0571200-01	Rice	cytosol	52.8	38.97
TraesCS7B01G436800.1	Wheat	cytosol	52.34	38.36
EES15243	Sorghum	cytosol, peroxisome, plastid	51.87	38.28
Zm00001d019750_P001	Maize	cytosol	55.61	36.73
TraesCS4D01G001900.1	Wheat	cytosol	55.61	36.73
Solyc03g025340.1.1	Tomato	cytosol	58.88	36.1
PGSC0003DMT400026228	Potato	cytosol	58.41	35.61
EER98534	Sorghum	cytosol	55.14	35.54
TraesCS7A01G520000.1	Wheat	cytosol	51.87	35.46
HORVU4Hr1G000850.1	Barley	cytosol	53.74	35.28
Zm00001d005315_P001	Maize	cytosol, extracellular	54.21	35.05
TraesCS7D01G509700.1	Wheat	cytosol	52.8	34.56
TraesCS4A01G312300.1	Wheat	cytosol	52.8	34.35
TraesCS7B01G436400.1	Wheat	cytosol	51.4	34.06
TraesCS4B01G001000.1	Wheat	cytosol	53.74	33.14
CDY06697	Canola	cytosol	29.44	19.75
CDY10267	Canola	cytosol	28.5	19.18
CDY09924	Canola	cytosol	28.5	18.37
CDY06250	Canola	cytosol	26.64	16.52

Protein Annotations

EnsemblPlants:CDX87149	EnsemblPlantsGene:GSBRNA2T00146068001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF17	PFAM:PF00168	PFscan:PS50004	ProteinID:CDX87149
ProteinID:CDX87149.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EE098A	MapMan:35.2

Description

BnaC09g04640D

Coordinates

chrLK031849:-:795444..796391

Molecular Weight (calculated)

23081.6 Da

IEP (calculated)

4.179

GRAVY (calculated)

-0.627

Length

214 amino acids

Sequence
(BLAST)

001: MSSRGREVEV TISSAKDIKN VNWRNGPNKP YAVVWIDPKY KFSTRVDEED DTCPSWNQTF VIPLPPGNDD DYEDDKVYID VVHAGGEENT KPLIGSANLS
101: LRDVIDDAGF GVPVEKTLKL KRPSGRPHGK LDVTVTVREP RYQPAPGSYH APPQPKEKGS KFGGMGTGLA VGAVAGVLGG VALAEGLDAV EDDIAEEAAE
201: DVEDDDAGED DEDF

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.