Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
21433289
nucleus: 24133045 plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU6Hr1G020740.1 | Barley | cytosol | 32.99 | 69.06 |
HORVU6Hr1G020750.2 | Barley | cytosol | 65.64 | 68.21 |
Os09t0571200-01 | Rice | cytosol | 67.35 | 67.59 |
TraesCS6B01G143000.1 | Wheat | cytosol | 65.64 | 64.75 |
Zm00001d031892_P001 | Maize | cytosol | 62.54 | 64.54 |
TraesCS6D01G104000.1 | Wheat | cytosol | 63.57 | 64.01 |
TraesCS6A01G115400.1 | Wheat | cytosol | 65.98 | 64.0 |
GSMUA_Achr10P... | Banana | cytosol | 46.05 | 61.47 |
EES15243 | Sorghum | cytosol, peroxisome, plastid | 58.76 | 58.97 |
CDX87149 | Canola | cytosol | 40.21 | 54.67 |
GSMUA_Achr11P... | Banana | cytosol | 12.37 | 52.94 |
Solyc06g036110.1.1 | Tomato | cytosol, extracellular | 45.02 | 52.82 |
CDY16874 | Canola | cytosol | 39.52 | 52.51 |
VIT_16s0050g01310.t01 | Wine grape | cytosol | 47.77 | 51.87 |
PGSC0003DMT400076930 | Potato | cytosol | 47.42 | 51.11 |
KRH38406 | Soybean | nucleus | 48.8 | 50.53 |
VIT_16s0050g01300.t01 | Wine grape | cytosol | 46.05 | 50.0 |
Bra026474.1-P | Field mustard | cytosol | 43.99 | 49.42 |
KRH08884 | Soybean | cytosol | 42.27 | 48.05 |
VIT_16s0050g00850.t01 | Wine grape | cytosol | 45.02 | 45.8 |
AT5G23950.2 | Thale cress | cytosol | 35.4 | 43.83 |
Solyc03g025340.1.1 | Tomato | cytosol | 49.14 | 40.97 |
PGSC0003DMT400026228 | Potato | cytosol | 48.8 | 40.46 |
KRH08885 | Soybean | cytosol | 31.62 | 38.49 |
Os01t0853800-01 | Rice | plastid | 38.14 | 33.95 |
Protein Annotations
Gene3D:2.60.40.150 | MapMan:35.2 | EntrezGene:4346336 | EMBL:AK061296 | EMBL:AK099905 | ProteinID:BAD09616.1 |
ProteinID:BAF24435.1 | ProteinID:BAT06719.1 | InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:EAZ43672.1 | GO:GO:0005575 |
GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000008 | InterPro:IPR035892 | EnsemblPlantsGene:Os08g0562600 | EnsemblPlants:Os08t0562600-03 |
PFAM:PF00168 | PFscan:PS50004 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF52 | UniProt:Q6ZBX9 | SMART:SM00239 |
SUPFAM:SSF49562 | TMHMM:TMhelix | UniParc:UPI000023AEA6 | RefSeq:XP_015649852.1 | SEG:seg | : |
Description
C2 calcium-dependent membrane targeting domain containing protein. (Os08t0562600-03)
Coordinates
chr8:-:28170523..28172296
Molecular Weight (calculated)
30346.2 Da
IEP (calculated)
4.556
GRAVY (calculated)
-0.480
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYEVEVT VSSARDLKNV NWRNGDLKPY AVLWVDDGAK CSTRVDLDNA DNPNWDDKLT LPLPPSSRLD DALLYLDVVH ANAAEGVKPL VGSARLPLRD
101: VLDDAGVGAR VSRSLRLKRP SGRPQGRLDL RLAVRESARY YDPSPYPAPY GQPAGTRDPY GAPPPAYSSG SGGQYPYGGG YGSGGYAAPP AGYPSAYGAP
201: PQPAYGGAPP VAAYGAAGGA PVVVEETKKK SKMGMGTGLA VGAAAGVLGG LALAGGASYL EDKFEEGVAE KVEDDLDRDD DYAAGGYDDD Y
101: VLDDAGVGAR VSRSLRLKRP SGRPQGRLDL RLAVRESARY YDPSPYPAPY GQPAGTRDPY GAPPPAYSSG SGGQYPYGGG YGSGGYAAPP AGYPSAYGAP
201: PQPAYGGAPP VAAYGAAGGA PVVVEETKKK SKMGMGTGLA VGAAAGVLGG LALAGGASYL EDKFEEGVAE KVEDDLDRDD DYAAGGYDDD Y
001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.