Factsheet for TraesCS6A01G115400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G143000.1	Wheat	cytosol	75.0	76.27
HORVU6Hr1G020740.1	Barley	cytosol	35.33	76.26
HORVU6Hr1G020750.2	Barley	cytosol	69.33	74.29
TraesCS6D01G104000.1	Wheat	cytosol	69.0	71.63
Os08t0562600-03	Rice	plastid	64.0	65.98
Zm00001d031892_P001	Maize	cytosol	60.33	64.18
Os09t0571200-01	Rice	cytosol	59.0	61.03
EES15243	Sorghum	cytosol, peroxisome, plastid	58.0	60.0
GSMUA_Achr10P...	Banana	cytosol	42.33	58.26
TraesCS7A01G520000.1	Wheat	cytosol	60.0	57.51
TraesCS4A01G312300.1	Wheat	cytosol	62.33	56.84
CDX87149	Canola	cytosol	39.33	55.14
CDY16874	Canola	cytosol	37.67	51.6
Solyc06g036110.1.1	Tomato	cytosol, extracellular	42.33	51.21
PGSC0003DMT400076930	Potato	cytosol	45.0	50.0
KRH38406	Soybean	nucleus	46.67	49.82
Bra026474.1-P	Field mustard	cytosol	42.33	49.03
VIT_16s0050g01310.t01	Wine grape	cytosol	43.67	48.88
KRH08884	Soybean	cytosol	40.33	47.27
VIT_16s0050g01300.t01	Wine grape	cytosol	42.0	47.01
GSMUA_Achr11P...	Banana	cytosol	10.33	45.59
AT5G23950.2	Thale cress	cytosol	35.33	45.11
VIT_16s0050g00850.t01	Wine grape	cytosol	42.67	44.76
Solyc03g025340.1.1	Tomato	cytosol	49.0	42.12
PGSC0003DMT400026228	Potato	cytosol	48.33	41.31
KRH08885	Soybean	cytosol	32.0	40.17
TraesCS3A01G367800.1	Wheat	plastid	32.67	26.7

Protein Annotations

EnsemblPlants:TraesCS6A01G115400.1	EnsemblPlantsGene:TraesCS6A01G115400	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	PFAM:PF00168	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TIGR:cd04051	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr6A:+:85261630..85262743

Molecular Weight (calculated)

30922.6 Da

IEP (calculated)

4.488

GRAVY (calculated)

-0.504

Length

300 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSARDLKNV NWRNGDLQPY AVLWVDDGPK CSSRVDVDNG ESPEWDEKLT VPLPPSAARL EDAVLHIDVV HAGAAEGTKP LVGSARLPLR
101: DVLDDAGLGG RALRSLRLKR PSGRPQGRLD VRVAVREAAR YYDPAYTPPA YGQSQSQSRD PYAAPAPYGS GGYGYGQQQQ QPYAAPPSGY PAAYGAAAPP
201: QPAGYPAAYG GGAQPAYGAA APAPAYGSGG YGSGSVSDPA QKKKGMGMGA GLAVGAAAGV LGGLALAEGA SYLEDKFEDD AAEKVEDDLA GGGGYDDDDY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.