Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87149 | Canola | cytosol | 88.13 | 90.19 |
| Bra026474.1-P | Field mustard | cytosol | 90.87 | 76.83 |
| AT5G23950.2 | Thale cress | cytosol | 68.95 | 64.26 |
| Solyc06g036110.1.1 | Tomato | cytosol, extracellular | 58.45 | 51.61 |
| HORVU6Hr1G020740.1 | Barley | cytosol | 31.51 | 49.64 |
| PGSC0003DMT400076930 | Potato | cytosol | 58.45 | 47.41 |
| KRH08884 | Soybean | cytosol | 54.79 | 46.88 |
| GSMUA_Achr10P... | Banana | cytosol | 46.58 | 46.79 |
| KRH38406 | Soybean | nucleus | 59.36 | 46.26 |
| GSMUA_Achr11P... | Banana | cytosol | 14.16 | 45.59 |
| VIT_16s0050g01310.t01 | Wine grape | cytosol | 53.88 | 44.03 |
| VIT_16s0050g01300.t01 | Wine grape | cytosol | 52.51 | 42.91 |
| HORVU6Hr1G020750.2 | Barley | cytosol | 53.42 | 41.79 |
| TraesCS6D01G104000.1 | Wheat | cytosol | 54.79 | 41.52 |
| KRH08885 | Soybean | cytosol | 43.84 | 40.17 |
| VIT_16s0050g00850.t01 | Wine grape | cytosol | 52.05 | 39.86 |
| Zm00001d031892_P001 | Maize | cytosol | 51.14 | 39.72 |
| TraesCS6B01G143000.1 | Wheat | cytosol | 53.42 | 39.66 |
| Os08t0562600-03 | Rice | plastid | 52.51 | 39.52 |
| Os09t0571200-01 | Rice | cytosol | 51.6 | 38.97 |
| TraesCS6A01G115400.1 | Wheat | cytosol | 51.6 | 37.67 |
| EES15243 | Sorghum | cytosol, peroxisome, plastid | 49.77 | 37.59 |
| TraesCS7B01G436800.1 | Wheat | cytosol | 49.77 | 37.33 |
| Zm00001d019750_P001 | Maize | cytosol | 54.34 | 36.73 |
| PGSC0003DMT400026228 | Potato | cytosol | 58.45 | 36.47 |
| Solyc03g025340.1.1 | Tomato | cytosol | 57.99 | 36.39 |
| TraesCS4D01G001900.1 | Wheat | cytosol | 52.97 | 35.8 |
| EER98534 | Sorghum | cytosol | 52.97 | 34.94 |
| TraesCS7A01G520000.1 | Wheat | cytosol | 49.77 | 34.82 |
| Zm00001d005315_P001 | Maize | cytosol, extracellular | 52.05 | 34.44 |
| HORVU4Hr1G000850.1 | Barley | cytosol | 51.14 | 34.36 |
| TraesCS4A01G312300.1 | Wheat | cytosol | 50.68 | 33.74 |
| TraesCS7D01G509700.1 | Wheat | cytosol | 50.23 | 33.64 |
| TraesCS7B01G436400.1 | Wheat | cytosol | 49.32 | 33.44 |
| TraesCS4B01G001000.1 | Wheat | cytosol | 50.68 | 31.99 |
| CDY10267 | Canola | cytosol | 29.22 | 20.13 |
| CDY06697 | Canola | cytosol | 28.77 | 19.75 |
| CDY09924 | Canola | cytosol | 28.31 | 18.67 |
| CDY06250 | Canola | cytosol | 26.48 | 16.81 |
Protein Annotations
| EnsemblPlants:CDY16874 | EnsemblPlantsGene:GSBRNA2T00094763001 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF52 | PFAM:PF00168 | PFscan:PS50004 | ProteinID:CDY16874 |
| ProteinID:CDY16874.1 | SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0004EDFA98 | UniProt:A0A078FV09 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA09g05080DBnaA09g05080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV09]
Coordinates
chrLK032067:+:766518..767704
Molecular Weight (calculated)
23690.3 Da
IEP (calculated)
4.278
GRAVY (calculated)
-0.613
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGREVEV TISSAKNIKN VNWRNGPNKP YAVVWIDPKY KFSTRVDEED DTCPSWNQTF VIPLPPGNDD YDDDKVYIDV VHAGGEENTK PLIGSAHLSL
101: RDVIDDVGFG VPVEKTLKLK RPSGRPHGKL DVTVTVREPR YQPAPGSYHA PPYGYTHAPP QPKGSKFGGM GTGLAVGAVA GVLGGVALAE GLDEVEDDIA
201: EEAAEDVEDD DAGEDDEDF
101: RDVIDDVGFG VPVEKTLKLK RPSGRPHGKL DVTVTVREPR YQPAPGSYHA PPYGYTHAPP QPKGSKFGGM GTGLAVGAVA GVLGGVALAE GLDEVEDDIA
201: EEAAEDVEDD DAGEDDEDF
001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.