Factsheet for TraesCS4A01G312300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G001000.1	Wheat	cytosol	88.15	83.57
TraesCS4D01G001900.1	Wheat	cytosol	82.07	83.33
HORVU4Hr1G000850.1	Barley	cytosol	76.29	76.99
TraesCS7A01G520000.1	Wheat	cytosol	69.0	72.52
Zm00001d019750_P001	Maize	cytosol	63.53	64.51
TraesCS6A01G115400.1	Wheat	cytosol	56.84	62.33
EER98534	Sorghum	cytosol	62.31	61.75
Zm00001d005315_P001	Maize	cytosol, extracellular	58.36	58.01
GSMUA_Achr10P...	Banana	cytosol	37.39	56.42
CDX87149	Canola	cytosol	34.35	52.8
CDY16874	Canola	cytosol	33.74	50.68
GSMUA_Achr11P...	Banana	cytosol	10.33	50.0
Solyc06g036110.1.1	Tomato	cytosol, extracellular	35.87	47.58
VIT_16s0050g01310.t01	Wine grape	cytosol	38.6	47.39
KRH38406	Soybean	nucleus	40.12	46.98
VIT_16s0050g01300.t01	Wine grape	cytosol	37.69	46.27
KRH08884	Soybean	cytosol	35.56	45.7
Bra026474.1-P	Field mustard	cytosol	35.87	45.56
AT5G23950.2	Thale cress	cytosol	31.91	44.68
PGSC0003DMT400076930	Potato	cytosol	36.47	44.44
VIT_16s0050g00850.t01	Wine grape	cytosol	36.47	41.96
Solyc03g025340.1.1	Tomato	cytosol	44.38	41.83
PGSC0003DMT400026228	Potato	cytosol	43.16	40.46
KRH08885	Soybean	cytosol	28.88	39.75
TraesCS3A01G367800.1	Wheat	plastid	31.91	28.61

Protein Annotations

EnsemblPlants:TraesCS4A01G312300.1	EnsemblPlantsGene:TraesCS4A01G312300	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	PFAM:PF00168	PFscan:PS50004	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	TIGR:cd04051	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr4A:-:603533796..603535084

Molecular Weight (calculated)

33103.3 Da

IEP (calculated)

6.551

GRAVY (calculated)

-0.438

Length

329 amino acids

Sequence
(BLAST)

001: MGSRYEVEIT VGSARDLKNV NWRNGDLKPY AVLWIDAGAR CSTRVDLDNG DNPAWDEKVV VPLPPASRLE DAVLYIDVVH ANAAEGVKPL VGSARLPLRD
101: VGGKASRNLK LKRPSGRPQG KLDVRVAVKE PARYYDNNPG GYPAPAGYGS SRDAYGGGYG AAAGAGGYGA YAAAAPPSGY PGYGSAAPPP HAAAPYGSAP
201: PPYGAAPPTQ GAGGYGSSVQ PAYGAAAQQT QGAGGYGSSA SAYGAGQGAG YGGTTGVGLD QSGGKTKKKG MGMAGGLAVG AAAGVLGGLA LAGGASYVEN
301: KIEDRVTERV EEDMYRGGGY DDYGGDDDY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.