Factsheet for GSMUA_Achr10P06710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	20.18	64.71
HORVU6Hr1G020740.1	Barley	cytosol	33.49	52.52
CDX87149	Canola	cytosol	47.71	48.6
CDY16874	Canola	cytosol	46.79	46.58
Os08t0562600-03	Rice	plastid	61.47	46.05
Zm00001d031892_P001	Maize	cytosol	59.17	45.74
HORVU6Hr1G020750.2	Barley	cytosol	58.72	45.71
TraesCS6D01G104000.1	Wheat	cytosol	60.55	45.67
Os09t0571200-01	Rice	cytosol	60.55	45.52
TraesCS6B01G143000.1	Wheat	cytosol	60.55	44.75
EES15243	Sorghum	cytosol, peroxisome, plastid	59.17	44.48
KRH08884	Soybean	cytosol	51.38	43.75
TraesCS6A01G115400.1	Wheat	cytosol	58.26	42.33
KRH38406	Soybean	nucleus	54.13	41.99
Solyc06g036110.1.1	Tomato	cytosol, extracellular	47.71	41.94
VIT_16s0050g01310.t01	Wine grape	cytosol	50.92	41.42
TraesCS7B01G436800.1	Wheat	cytosol	54.59	40.75
VIT_16s0050g01300.t01	Wine grape	cytosol	49.08	39.93
VIT_16s0050g00850.t01	Wine grape	cytosol	52.29	39.86
Bra026474.1-P	Field mustard	cytosol	46.79	39.38
TraesCS7A01G520000.1	Wheat	cytosol	56.42	39.3
TraesCS4D01G001900.1	Wheat	cytosol	57.8	38.89
PGSC0003DMT400076930	Potato	cytosol	48.17	38.89
Zm00001d019750_P001	Maize	cytosol	57.8	38.89
AT5G23950.2	Thale cress	cytosol	41.28	38.3
Zm00001d005315_P001	Maize	cytosol, extracellular	57.8	38.07
EER98534	Sorghum	cytosol	57.8	37.95
TraesCS4A01G312300.1	Wheat	cytosol	56.42	37.39
TraesCS7B01G436400.1	Wheat	cytosol	55.05	37.15
HORVU4Hr1G000850.1	Barley	cytosol	55.5	37.12
TraesCS7D01G509700.1	Wheat	cytosol	55.05	36.7
TraesCS4B01G001000.1	Wheat	cytosol	57.8	36.31
KRH08885	Soybean	cytosol	36.7	33.47
Solyc03g025340.1.1	Tomato	cytosol	53.21	33.24
PGSC0003DMT400026228	Potato	cytosol	50.92	31.62
GSMUA_Achr10P...	Banana	cytosol	47.25	31.21

Protein Annotations

EnsemblPlants:GSMUA_Achr10P06710_001	EnsemblPlants:GSMUA_Achr10T06710_001	EnsemblPlantsGene:GSMUA_Achr10G06710_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	PFAM:PF00168	PFscan:PS50004
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000296E325	UniProt:M0RFZ8	MapMan:35.2

Description

C2 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G06710_001]

Coordinates

chr10:+:17003935..17004958

Molecular Weight (calculated)

23036.3 Da

IEP (calculated)

4.732

GRAVY (calculated)

-0.251

Length

218 amino acids

Sequence
(BLAST)

001: MAARYEVEVT VASARNLKNV NWRHGDLKPY VVAWVDPAAK CSTKVAVDGD DDDPVWDEKL TLPVPPGLPI EDATLAFDVV HAGAAEGVKP LVGSARLPLR
101: DVLDEVGLSG KLVRALKLKR PSGRPQGKIE IKVAVKEQAR YYGSPYGQAT SRDYPPSSAG YGYGPPKSKF GMGTGLAVGA AAGMLGGLAL AEGIDYAEDK
201: IADDVAERVE DDLGGDDF

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.