Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G143000.1 | Wheat | cytosol | 87.89 | 86.1 |
| HORVU6Hr1G020750.2 | Barley | cytosol | 79.24 | 81.79 |
| HORVU6Hr1G020740.1 | Barley | cytosol | 37.37 | 77.7 |
| TraesCS6A01G115400.1 | Wheat | cytosol | 71.63 | 69.0 |
| Zm00001d031892_P001 | Maize | cytosol | 62.28 | 63.83 |
| Os08t0562600-03 | Rice | plastid | 64.01 | 63.57 |
| Os09t0571200-01 | Rice | cytosol | 63.32 | 63.1 |
| GSMUA_Achr10P... | Banana | cytosol | 45.67 | 60.55 |
| TraesCS4D01G001900.1 | Wheat | cytosol | 63.67 | 56.79 |
| EES15243 | Sorghum | cytosol, peroxisome, plastid | 56.75 | 56.55 |
| CDX87149 | Canola | cytosol | 41.52 | 56.07 |
| CDY16874 | Canola | cytosol | 41.52 | 54.79 |
| TraesCS7D01G509700.1 | Wheat | cytosol | 59.52 | 52.6 |
| Solyc06g036110.1.1 | Tomato | cytosol, extracellular | 44.98 | 52.42 |
| PGSC0003DMT400076930 | Potato | cytosol | 48.79 | 52.22 |
| KRH38406 | Soybean | nucleus | 50.52 | 51.96 |
| KRH08884 | Soybean | cytosol | 45.33 | 51.17 |
| VIT_16s0050g01310.t01 | Wine grape | cytosol | 47.06 | 50.75 |
| VIT_16s0050g01300.t01 | Wine grape | cytosol | 45.33 | 48.88 |
| Bra026474.1-P | Field mustard | cytosol | 42.91 | 47.88 |
| GSMUA_Achr11P... | Banana | cytosol | 11.07 | 47.06 |
| VIT_16s0050g00850.t01 | Wine grape | cytosol | 46.02 | 46.5 |
| AT5G23950.2 | Thale cress | cytosol | 36.68 | 45.11 |
| KRH08885 | Soybean | cytosol | 35.64 | 43.1 |
| Solyc03g025340.1.1 | Tomato | cytosol | 51.21 | 42.41 |
| PGSC0003DMT400026228 | Potato | cytosol | 50.52 | 41.6 |
| TraesCS3D01G360800.1 | Wheat | plastid | 36.33 | 27.56 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G104000.1 | EnsemblPlantsGene:TraesCS6D01G104000 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF52 | PFAM:PF00168 | PFscan:PS50004 | SEG:seg |
| SMART:SM00239 | SUPFAM:SSF49562 | TIGR:cd04051 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6D:+:67569268..67570137
Molecular Weight (calculated)
29907.7 Da
IEP (calculated)
4.591
GRAVY (calculated)
-0.472
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYEVEVT VGSARDLKNV NWRNGDLQPY AVLWVDDGPK CSSRVDLDNG ESPVWDEKLT VPLPPSTARL EDAVLRIDVV HANAGGGTKP LVGSARLPLR
101: DVLDDAGLGG RASRTLRLKR PSGRPQGRLD VRVAVREAAA RYYDPAYPPP YGQSQPQSRD PYAAPAPYGS GGYGYGQQQP YAAPPSGYPA AYGAAAPPQP
201: AGYPAAYGGG AQPAYGAAPA PAYGSVSDPA AKKKGMGMGA GLAVGAAAGV LGGLALAEGA SYLEDKIEDD VAEKVEDDLA GGGYDDDDY
101: DVLDDAGLGG RASRTLRLKR PSGRPQGRLD VRVAVREAAA RYYDPAYPPP YGQSQPQSRD PYAAPAPYGS GGYGYGQQQP YAAPPSGYPA AYGAAAPPQP
201: AGYPAAYGGG AQPAYGAAPA PAYGSVSDPA AKKKGMGMGA GLAVGAAAGV LGGLALAEGA SYLEDKIEDD VAEKVEDDLA GGGYDDDDY
001: MSSHGREVEV TISSAKDIKN VNWRNGPNKP YAVVWIDPKF KSSTRVDEDG NTCTTWNETF VIALPPANDD DDKVYINIVH AGREENTKPL IGSAHLSLRD
101: VIDDVGFGVP FMKTLKLKRP SGRPQGKLDV TVTVRETPGS NYALPYGDPY APEKGSKFGG MGTGLAVGAV AGVLGGVALA EGLEAVEGDE DDDDDDDAAA
201: AAAADDDDDD DDDDDDDDE
101: VIDDVGFGVP FMKTLKLKRP SGRPQGKLDV TVTVRETPGS NYALPYGDPY APEKGSKFGG MGTGLAVGAV AGVLGGVALA EGLEAVEGDE DDDDDDDAAA
201: AAAADDDDDD DDDDDDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.