Factsheet for TraesCS7D01G509700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G436400.1	Wheat	cytosol	84.4	85.45
TraesCS7A01G520000.1	Wheat	cytosol	80.43	84.03
HORVU4Hr1G000850.1	Barley	cytosol	80.43	80.67
TraesCS4D01G001900.1	Wheat	cytosol	74.62	75.31
Zm00001d019750_P001	Maize	cytosol	60.55	61.11
EER98534	Sorghum	cytosol	61.16	60.24
TraesCS6D01G104000.1	Wheat	cytosol	52.6	59.52
Zm00001d005315_P001	Maize	cytosol, extracellular	57.8	57.1
GSMUA_Achr10P...	Banana	cytosol	36.7	55.05
CDX87149	Canola	cytosol	34.56	52.8
CDY16874	Canola	cytosol	33.64	50.23
Solyc06g036110.1.1	Tomato	cytosol, extracellular	37.31	49.19
GSMUA_Achr11P...	Banana	cytosol	10.09	48.53
KRH08884	Soybean	cytosol	37.92	48.44
KRH38406	Soybean	nucleus	41.28	48.04
VIT_16s0050g01310.t01	Wine grape	cytosol	39.14	47.76
VIT_16s0050g01300.t01	Wine grape	cytosol	38.23	46.64
PGSC0003DMT400076930	Potato	cytosol	38.23	46.3
Bra026474.1-P	Field mustard	cytosol	36.09	45.56
AT5G23950.2	Thale cress	cytosol	31.8	44.26
VIT_16s0050g00850.t01	Wine grape	cytosol	37.31	42.66
KRH08885	Soybean	cytosol	28.44	38.91
Solyc03g025340.1.1	Tomato	cytosol	40.67	38.11
PGSC0003DMT400026228	Potato	cytosol	40.67	37.89
TraesCS3D01G360800.1	Wheat	plastid	31.8	27.3

Protein Annotations

EnsemblPlants:TraesCS7D01G509700.1	EnsemblPlantsGene:TraesCS7D01G509700	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	PFAM:PF00168	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TIGR:cd04051	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7D:+:612977377..612978427

Molecular Weight (calculated)

32861.3 Da

IEP (calculated)

8.254

GRAVY (calculated)

-0.319

Length

327 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGAARDLKNV NWRNGDLKPY AVLWIDAGAR CSTRVDLDSN ENPAWDEKVV VPLPPASRLQ DAVLYLDVVH ANAAEGVKPL VGSARLPLRD
101: VVDDAGVGGK VSRNLKLKRP SGRPQGKLDV RVAVKEPARY YESNPGAYPA PAGYGSSQPS GPYGGGSSRD AYGGYGAGAG AYGAAAAPGG YGAYAVAAPP
201: SGYPGYASTA QAPQAAAPYG SAPPPYGAAP PTQGAGAYGS SAPAYGEAQP AQAAGYGSAA PAYGTTGVPL DQSGGKKKKG MGMAGGLAVG AAAGVLGGLA
301: LAGGASYVEH KIEDRVTERV EEDMYGG

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.