Factsheet for Zm00001d019750_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98534	Sorghum	cytosol	84.26	82.23
Zm00001d005315_P001	Maize	cytosol, extracellular	70.99	69.49
HORVU4Hr1G000850.1	Barley	cytosol	66.36	65.95
TraesCS4D01G001900.1	Wheat	cytosol	65.74	65.74
TraesCS7B01G436800.1	Wheat	cytosol	57.72	64.04
TraesCS4A01G312300.1	Wheat	cytosol	64.51	63.53
TraesCS7A01G520000.1	Wheat	cytosol	60.8	62.94
TraesCS4B01G001000.1	Wheat	cytosol	66.98	62.54
Zm00001d031892_P001	Maize	cytosol	54.32	62.41
TraesCS7D01G509700.1	Wheat	cytosol	61.11	60.55
TraesCS7B01G436400.1	Wheat	cytosol	58.95	59.13
GSMUA_Achr10P...	Banana	cytosol	38.89	57.8
CDX87149	Canola	cytosol	36.73	55.61
CDY16874	Canola	cytosol	36.73	54.34
GSMUA_Achr11P...	Banana	cytosol	11.11	52.94
Solyc06g036110.1.1	Tomato	cytosol, extracellular	37.96	49.6
KRH38406	Soybean	nucleus	41.67	48.04
PGSC0003DMT400076930	Potato	cytosol	39.81	47.78
VIT_16s0050g01310.t01	Wine grape	cytosol	39.51	47.76
Bra026474.1-P	Field mustard	cytosol	37.96	47.49
VIT_16s0050g01300.t01	Wine grape	cytosol	39.2	47.39
KRH08884	Soybean	cytosol	37.04	46.88
AT5G23950.2	Thale cress	cytosol	33.64	46.38
VIT_16s0050g00850.t01	Wine grape	cytosol	38.89	44.06
KRH08885	Soybean	cytosol	28.7	38.91
Solyc03g025340.1.1	Tomato	cytosol	41.36	38.4
PGSC0003DMT400026228	Potato	cytosol	41.05	37.89
Zm00001d012336_P001	Maize	mitochondrion	32.72	32.42

Protein Annotations

EntrezGene:100279462	Gene3D:2.60.40.150	MapMan:35.2	UniProt:B7ZY87	EMBL:BT054279	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
ProteinID:ONM53685.1	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0001917490	EnsemblPlantsGene:Zm00001d019750	EnsemblPlants:Zm00001d019750_P001	EnsemblPlants:Zm00001d019750_T001
SEG:seg	:	:	:	:	:

Description

Calcium-dependent lipid-binding (CaLB domain) family protein

Coordinates

chr7:+:56217746..56218720

Molecular Weight (calculated)

33215.3 Da

IEP (calculated)

4.903

GRAVY (calculated)

-0.461

Length

324 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSARDLKNV NWRNGELKPY AVVWIDSGAK CSTRVDLDNG ENPTWDEKLL VPLPPTSRLD DAVLYIDVVH ANAAEGVKPL VGSARLPLRD
101: VLDDAGIGGK ASRNLRLKRP SGRPHGHLDV RVAVKEPSRY YDPNPYPAPA GYANAGTRDP YGSSAAAGGY YGSGGGYGSG GGYGGSGSYG AAQPYTAAPP
201: AGYPSTYGSA PPPQPGYGAP PVAAAYGAPP VAAAYGAPPV DAATAAYGTS AVGADGKKKN KMGMGTGLAV GAAAGVLGGL ALAGGASYLE DKFEERVSER
301: VEENLEREDS YGGGYDNYGG DDDY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.