CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019750_P001	Maize	cytosol	82.23	84.26
TraesCS7B01G436800.1	Wheat	cytosol	58.13	66.1
HORVU4Hr1G000850.1	Barley	cytosol	64.16	65.34
TraesCS4D01G001900.1	Wheat	cytosol	63.25	64.81
TraesCS7A01G520000.1	Wheat	cytosol	60.24	63.9
TraesCS4A01G312300.1	Wheat	cytosol	61.75	62.31
TraesCS4B01G001000.1	Wheat	cytosol	64.16	61.38
TraesCS7D01G509700.1	Wheat	cytosol	60.24	61.16
TraesCS7B01G436400.1	Wheat	cytosol	59.34	60.99
EES15243	Sorghum	cytosol, peroxisome, plastid	51.2	58.62
GSMUA_Achr10P...	Banana	cytosol	37.95	57.8
CDX87149	Canola	cytosol	35.54	55.14
GSMUA_Achr11P...	Banana	cytosol	11.14	54.41
CDY16874	Canola	cytosol	34.94	52.97
Solyc06g036110.1.1	Tomato	cytosol, extracellular	38.55	51.61
KRH38406	Soybean	nucleus	42.47	50.18
PGSC0003DMT400076930	Potato	cytosol	39.76	48.89
KRH08884	Soybean	cytosol	36.75	47.66
VIT_16s0050g01310.t01	Wine grape	cytosol	38.25	47.39
AT5G23950.2	Thale cress	cytosol	32.83	46.38
Bra026474.1-P	Field mustard	cytosol	36.14	46.33
VIT_16s0050g01300.t01	Wine grape	cytosol	37.35	46.27
VIT_16s0050g00850.t01	Wine grape	cytosol	38.86	45.1
KRH08885	Soybean	cytosol	28.31	39.33
Solyc03g025340.1.1	Tomato	cytosol	38.86	36.96
PGSC0003DMT400026228	Potato	cytosol	37.95	35.9
KXG33717	Sorghum	mitochondrion	33.43	28.76

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.2	EntrezGene:8061718	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5X6M3
EnsemblPlants:EER98534	ProteinID:EER98534	ProteinID:EER98534.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52
SMART:SM00239	EnsemblPlantsGene:SORBI_3002G138700	SUPFAM:SSF49562	unigene:Sbi.13250	TMHMM:TMhelix	UniParc:UPI0001A841EC
RefSeq:XP_002462013.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:21613286..21614284

Molecular Weight (calculated)

33722.9 Da

IEP (calculated)

5.034

GRAVY (calculated)

-0.456

Length

332 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSARDLKNV NWRNGDLKPY AVVWIDSGAK TSTRVDLDNG ENPAWDEKLL VPLPPTSRLD DAVLYIDVVH ANAAEGVKPL VGSARLPLRD
101: VLDDAGVGGK ASRNLRLKRP SGRPHGRLDV RVAVKEPSRY YDPNPYPAPA GYANSAGARD PYGSSAAGGY YGSGGGYGGS GGGYRSGGGA YGSGVGGGYG
201: AAQPYTAAPP AGYPSTYGSA PPPPQPAYGA PPVAATAAAY GAPPVAATAG YGTAAVGADG KKKNKMGMGT GLAVGAAAGV LGGLALAGGA SYLEDKFEER
301: VSERVEENLE REDSYGGGYG GGYDDFGGDD DY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.