CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38406	Soybean	nucleus	57.74	49.11
GSMUA_Achr11P...	Banana	cytosol	13.81	48.53
HORVU6Hr1G020740.1	Barley	cytosol	26.36	45.32
CDX87149	Canola	cytosol	39.75	44.39
CDY16874	Canola	cytosol	40.17	43.84
KRH08884	Soybean	cytosol	45.61	42.58
AT5G23950.2	Thale cress	cytosol	39.75	40.43
Bra026474.1-P	Field mustard	cytosol	40.59	37.45
Solyc06g036110.1.1	Tomato	cytosol, extracellular	38.49	37.1
GSMUA_Achr10P...	Banana	cytosol	33.47	36.7
TraesCS6D01G104000.1	Wheat	cytosol	43.1	35.64
PGSC0003DMT400076930	Potato	cytosol	40.17	35.56
HORVU6Hr1G020750.2	Barley	cytosol	40.59	34.64
Os09t0571200-01	Rice	cytosol	41.42	34.14
Zm00001d031892_P001	Maize	cytosol	39.75	33.69
TraesCS6B01G143000.1	Wheat	cytosol	41.42	33.56
VIT_16s0050g00850.t01	Wine grape	cytosol	38.49	32.17
TraesCS6A01G115400.1	Wheat	cytosol	40.17	32.0
Os08t0562600-03	Rice	plastid	38.49	31.62
VIT_16s0050g01300.t01	Wine grape	cytosol	35.15	31.34
VIT_16s0050g01310.t01	Wine grape	cytosol	35.15	31.34
EES15243	Sorghum	cytosol, peroxisome, plastid	37.66	31.03
TraesCS4D01G001900.1	Wheat	cytosol	41.42	30.56
TraesCS7B01G436800.1	Wheat	cytosol	37.24	30.48
TraesCS7A01G520000.1	Wheat	cytosol	38.91	29.71
HORVU4Hr1G000850.1	Barley	cytosol	39.75	29.14
TraesCS4A01G312300.1	Wheat	cytosol	39.75	28.88
Zm00001d019750_P001	Maize	cytosol	38.91	28.7
TraesCS7D01G509700.1	Wheat	cytosol	38.91	28.44
Zm00001d005315_P001	Maize	cytosol, extracellular	39.33	28.4
EER98534	Sorghum	cytosol	39.33	28.31
TraesCS7B01G436400.1	Wheat	cytosol	38.08	28.17
PGSC0003DMT400026228	Potato	cytosol	41.0	27.92
Solyc03g025340.1.1	Tomato	cytosol	40.59	27.79
TraesCS4B01G001000.1	Wheat	cytosol	40.17	27.67
KRH31112	Soybean	cytosol	23.85	23.85
KRG97773	Soybean	cytosol	28.87	23.08

Protein Annotations

EMBL:ACUP02010215	EnsemblPlants:KRH08885	EnsemblPlantsGene:GLYMA_16G180400	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF17	PFAM:PF00168	ProteinID:KRH08885
ProteinID:KRH08885.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000233AC0C	UniProt:I1MPK0
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:34093033..34094634

Molecular Weight (calculated)

26263.1 Da

IEP (calculated)

4.377

GRAVY (calculated)

-0.656

Length

239 amino acids

Sequence
(BLAST)

001: MGSRYEVEVK PLSARALKNV NWRHGPNLPY VVVWADRSYL LSTSVDENGN TDANWNETLT IPLPAKPLED QNLFIHVVHA GSGEDTKSLI GKAWLRLVDI
101: VNDFGIGERV RCTLSLKRPS GRPQGKAEVS VTIRESSYGA QGGYNAPPNG APPQKANCYA TPSGYPYNAT AKGWATLAAV FGGISVEDAE YVDDKNQDDA
201: EEKRVEDDLG AEDKIQDNVE ARVEDDLGDH ADDDDDFWR

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.