Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g036110.1.1 | Tomato | cytosol, extracellular | 83.7 | 91.13 |
| CDX87149 | Canola | cytosol | 47.41 | 59.81 |
| CDY16874 | Canola | cytosol | 47.41 | 58.45 |
| VIT_16s0050g01310.t01 | Wine grape | cytosol | 56.3 | 56.72 |
| VIT_16s0050g01300.t01 | Wine grape | cytosol | 55.19 | 55.6 |
| Bra026474.1-P | Field mustard | cytosol | 50.74 | 52.9 |
| VIT_16s0050g00850.t01 | Wine grape | cytosol | 55.19 | 52.1 |
| KRH08884 | Soybean | cytosol | 49.26 | 51.95 |
| HORVU6Hr1G020740.1 | Barley | cytosol | 25.93 | 50.36 |
| KRH38406 | Soybean | nucleus | 51.11 | 49.11 |
| HORVU6Hr1G020750.2 | Barley | cytosol | 50.74 | 48.93 |
| TraesCS6D01G104000.1 | Wheat | cytosol | 52.22 | 48.79 |
| GSMUA_Achr11P... | Banana | cytosol | 12.22 | 48.53 |
| GSMUA_Achr10P... | Banana | cytosol | 38.89 | 48.17 |
| AT5G23950.2 | Thale cress | cytosol | 41.48 | 47.66 |
| TraesCS6B01G143000.1 | Wheat | cytosol | 51.85 | 47.46 |
| Os08t0562600-03 | Rice | plastid | 51.11 | 47.42 |
| PGSC0003DMT400026228 | Potato | cytosol | 59.26 | 45.58 |
| Zm00001d031892_P001 | Maize | cytosol | 47.04 | 45.04 |
| TraesCS6A01G115400.1 | Wheat | cytosol | 50.0 | 45.0 |
| Os09t0571200-01 | Rice | cytosol | 48.15 | 44.83 |
| EES15243 | Sorghum | cytosol, peroxisome, plastid | 47.04 | 43.79 |
| TraesCS7B01G436800.1 | Wheat | cytosol | 45.56 | 42.12 |
| HORVU4Hr1G000850.1 | Barley | cytosol | 48.89 | 40.49 |
| Zm00001d005315_P001 | Maize | cytosol, extracellular | 49.26 | 40.18 |
| KRH08885 | Soybean | cytosol | 35.56 | 40.17 |
| TraesCS7A01G520000.1 | Wheat | cytosol | 46.3 | 39.94 |
| Zm00001d019750_P001 | Maize | cytosol | 47.78 | 39.81 |
| TraesCS4D01G001900.1 | Wheat | cytosol | 47.78 | 39.81 |
| EER98534 | Sorghum | cytosol | 48.89 | 39.76 |
| TraesCS7D01G509700.1 | Wheat | cytosol | 46.3 | 38.23 |
| TraesCS7B01G436400.1 | Wheat | cytosol | 45.56 | 38.08 |
| TraesCS4B01G001000.1 | Wheat | cytosol | 47.78 | 37.18 |
| TraesCS4A01G312300.1 | Wheat | cytosol | 44.44 | 36.47 |
| PGSC0003DMT400015573 | Potato | cytosol | 33.7 | 28.17 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076930 | EnsemblPlantsGene:PGSC0003DMG400029920 | EntrezGene:102600321 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf |
| InterPro:IPR000008 | InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF52 | PFAM:PF00168 | PFscan:PS50004 |
| PGSC:PGSC0003DMG400029920 | RefSeq:XP_006363329.1 | SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002953782 |
| UniProt:M1CXL8 | MapMan:35.2 | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029920]
Coordinates
chr6:+:37560582..37561804
Molecular Weight (calculated)
28754.3 Da
IEP (calculated)
4.231
GRAVY (calculated)
-0.511
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYEVEVK ITSAKDLKNI NWRYGPLKPY AVVWVDPNSK CSTKVDEDGD TSPYWTDKLL IPLNSPIDES VLYIDIVHAV GAEEDTKPLI GSAKISLSEV
101: VDEAGVGGEV ERTLQLKRPS GRPQGKVEVQ VTVRDPRYRA RDAYYAPPYG VPPPAQPYNY GGAYGAPIPP YGQPAPGSYG QPAYGMGGYG QPAVGSYGQP
201: GGGYGYEEEK KKSKFGLGTG LAVGAVAGVL GGVAIAEGID HLEDSIAEDA AEKVEEDLAD DDGDYGDDDF
101: VDEAGVGGEV ERTLQLKRPS GRPQGKVEVQ VTVRDPRYRA RDAYYAPPYG VPPPAQPYNY GGAYGAPIPP YGQPAPGSYG QPAYGMGGYG QPAVGSYGQP
201: GGGYGYEEEK KKSKFGLGTG LAVGAVAGVL GGVAIAEGID HLEDSIAEDA AEKVEEDLAD DDGDYGDDDF
001: MSSHGREVEV TISSAKDIKN VNWRNGPNKP YAVVWIDPKF KSSTRVDEDG NTCTTWNETF VIALPPANDD DDKVYINIVH AGREENTKPL IGSAHLSLRD
101: VIDDVGFGVP FMKTLKLKRP SGRPQGKLDV TVTVRETPGS NYALPYGDPY APEKGSKFGG MGTGLAVGAV AGVLGGVALA EGLEAVEGDE DDDDDDDAAA
201: AAAADDDDDD DDDDDDDDE
101: VIDDVGFGVP FMKTLKLKRP SGRPQGKLDV TVTVRETPGS NYALPYGDPY APEKGSKFGG MGTGLAVGAV AGVLGGVALA EGLEAVEGDE DDDDDDDAAA
201: AAAADDDDDD DDDDDDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.