Factsheet for HORVU6Hr1G020750.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G020740.1	Barley	cytosol	41.07	82.73
TraesCS6B01G143000.1	Wheat	cytosol	85.71	81.36
TraesCS6D01G104000.1	Wheat	cytosol	81.79	79.24
TraesCS6A01G115400.1	Wheat	cytosol	74.29	69.33
Os08t0562600-03	Rice	plastid	68.21	65.64
Os09t0571200-01	Rice	cytosol	66.79	64.48
Zm00001d031892_P001	Maize	cytosol	60.0	59.57
GSMUA_Achr10P...	Banana	cytosol	45.71	58.72
HORVU4Hr1G000850.1	Barley	cytosol	65.36	56.13
EES15243	Sorghum	cytosol, peroxisome, plastid	57.14	55.17
CDX87149	Canola	cytosol	42.14	55.14
Solyc06g036110.1.1	Tomato	cytosol, extracellular	47.5	53.63
CDY16874	Canola	cytosol	41.79	53.42
VIT_16s0050g01310.t01	Wine grape	cytosol	50.36	52.61
VIT_16s0050g01300.t01	Wine grape	cytosol	49.64	51.87
PGSC0003DMT400076930	Potato	cytosol	48.93	50.74
KRH08884	Soybean	cytosol	46.07	50.39
GSMUA_Achr11P...	Banana	cytosol	12.14	50.0
KRH38406	Soybean	nucleus	50.0	49.82
VIT_16s0050g00850.t01	Wine grape	cytosol	50.0	48.95
Bra026474.1-P	Field mustard	cytosol	43.57	47.1
AT5G23950.2	Thale cress	cytosol	38.21	45.53
Solyc03g025340.1.1	Tomato	cytosol	51.79	41.55
KRH08885	Soybean	cytosol	34.64	40.59
PGSC0003DMT400026228	Potato	cytosol	50.71	40.46
HORVU3Hr1G085130.1	Barley	plastid	38.57	29.35

Protein Annotations

EMBL:AK373105	EnsemblPlants:HORVU6Hr1G020750.2	EnsemblPlantsGene:HORVU6Hr1G020750	Gene3D:2.60.40.150	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246
PANTHER:PTHR32246:SF52	PFAM:PF00168	PFscan:PS50004	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI00020082BF	UniProt:F2EAD0	MapMan:35.2	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EAD0]

Coordinates

chrchr6H:+:59869578..59871667

Molecular Weight (calculated)

29114.7 Da

IEP (calculated)

4.548

GRAVY (calculated)

-0.513

Length

280 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSARDLKNV NWRNGDLKPY AVVWVDDGAK CSTRVDLDHG ENPEWDEKLV VPLPPSTARL EDAVLRIDVV HADAADGTKP LVGSARLPLR
101: DVLDDAGLGG RASRSLRLNR PSGRPQGRLD VRVAVREAAR YYDPSYPPPY GQSARDPYAA PAPYGSGGGY GQQPPYAAPP SGYPAPYGAG YGGAPQGQPA
201: YGAAPAPAYG SGGYGSVDDP AKKKGMGMGT GLAVGAAAGV LGGLALAGGA SYLEEKIEDN VAEKVEDDLA GGGYYDDDDY

Best Arabidopsis Sequence Match ( AT1G07310.1 )
(BLAST)

001: MTSSEPLDLV VTVVSAKHLK NVNWRNGDLK PYVVLYLDQD HPLSTRSDDS SSIKPVWNER ITLPLTRSVH ESVLNIEVFH SNSSDLAKTL VGSVRFPLAR
101: LIDSDGSMIP ELINSLELVR PSGRPQGKIR LKLAIKDRPI PPPQHPPPRP QSQPLDYYSA PQGNHYYSPS PPPPPPPQAP ITAPSPQRDY REFSQSPSPS
201: PYAFTDHYYS GYYYPPPPPR SMYDRASNYG LPSGPSAPVD AFSSIDHKQP PLAPPRFSNY GPPPSGPSAP VDAFLVTEYK PQAPPMGSRL SSYGVPNGPS
301: APVDYSPYDH RQLQKTMGGL SLEEERAAAE RSESDFGARP NYSYGRDYRR EC

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LNV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.