Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076930 | Potato | cytosol | 91.13 | 83.7 |
| CDX87149 | Canola | cytosol | 51.61 | 59.81 |
| CDY16874 | Canola | cytosol | 51.61 | 58.45 |
| VIT_16s0050g01310.t01 | Wine grape | cytosol | 57.66 | 53.36 |
| VIT_16s0050g01300.t01 | Wine grape | cytosol | 56.85 | 52.61 |
| HORVU6Hr1G020740.1 | Barley | cytosol | 29.44 | 52.52 |
| KRH08884 | Soybean | cytosol | 53.23 | 51.56 |
| Bra026474.1-P | Field mustard | cytosol | 53.63 | 51.35 |
| AT5G23950.2 | Thale cress | cytosol | 45.56 | 48.09 |
| KRH38406 | Soybean | nucleus | 54.44 | 48.04 |
| VIT_16s0050g00850.t01 | Wine grape | cytosol | 55.24 | 47.9 |
| GSMUA_Achr10P... | Banana | cytosol | 41.94 | 47.71 |
| HORVU6Hr1G020750.2 | Barley | cytosol | 53.63 | 47.5 |
| GSMUA_Achr11P... | Banana | cytosol | 12.9 | 47.06 |
| Os08t0562600-03 | Rice | plastid | 52.82 | 45.02 |
| TraesCS6D01G104000.1 | Wheat | cytosol | 52.42 | 44.98 |
| TraesCS6B01G143000.1 | Wheat | cytosol | 52.82 | 44.41 |
| Solyc03g025340.1.1 | Tomato | cytosol | 60.89 | 43.27 |
| Zm00001d031892_P001 | Maize | cytosol | 48.79 | 42.91 |
| Os09t0571200-01 | Rice | cytosol | 50.0 | 42.76 |
| EES15243 | Sorghum | cytosol, peroxisome, plastid | 50.0 | 42.76 |
| TraesCS6A01G115400.1 | Wheat | cytosol | 51.21 | 42.33 |
| TraesCS7B01G436800.1 | Wheat | cytosol | 47.58 | 40.41 |
| TraesCS7A01G520000.1 | Wheat | cytosol | 49.19 | 38.98 |
| HORVU4Hr1G000850.1 | Barley | cytosol | 51.21 | 38.96 |
| EER98534 | Sorghum | cytosol | 51.61 | 38.55 |
| KRH08885 | Soybean | cytosol | 37.1 | 38.49 |
| TraesCS4D01G001900.1 | Wheat | cytosol | 50.0 | 38.27 |
| Zm00001d005315_P001 | Maize | cytosol, extracellular | 50.81 | 38.07 |
| Zm00001d019750_P001 | Maize | cytosol | 49.6 | 37.96 |
| TraesCS7D01G509700.1 | Wheat | cytosol | 49.19 | 37.31 |
| TraesCS7B01G436400.1 | Wheat | cytosol | 48.39 | 37.15 |
| TraesCS4A01G312300.1 | Wheat | cytosol | 47.58 | 35.87 |
| TraesCS4B01G001000.1 | Wheat | cytosol | 48.79 | 34.87 |
| Solyc09g082950.1.1 | Tomato | cytosol | 34.27 | 26.23 |
Protein Annotations
| EnsemblPlants:Solyc06g036110.1.1 | EnsemblPlantsGene:Solyc06g036110.1 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF52 | PFAM:PF00168 | PFscan:PS50004 | SEG:seg |
| SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI0002765F49 | UniProt:K4C4Y0 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:+:25557152..25557898
Molecular Weight (calculated)
26829.4 Da
IEP (calculated)
4.342
GRAVY (calculated)
-0.482
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRYEVEVK ITSAKDLKNI NWRYGPLKPY AVVWVDPNAK CSTRVDEDGD TSPYWNDKLV IPLYSPIDES VLYIDMVHAV GAEEDTKPLI GSAKIPLSEV
101: VEEAGVGGEV ERTLQLKRPS GRPQGKVKVQ VTVRDPRYRA RDAYYAPPYG VPPPAQPYNY GAPILPYGQP GVGNYGQAGG VYGYEEEKKK SKFGMGTGLA
201: VGAVAGVLGG VAIAEGIDHL ENSIAEDAAE KVEEDLADDD GDYGDDDF
101: VEEAGVGGEV ERTLQLKRPS GRPQGKVKVQ VTVRDPRYRA RDAYYAPPYG VPPPAQPYNY GAPILPYGQP GVGNYGQAGG VYGYEEEKKK SKFGMGTGLA
201: VGAVAGVLGG VAIAEGIDHL ENSIAEDAAE KVEEDLADDD GDYGDDDF
001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.