Factsheet for Zm00001d031892_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15243	Sorghum	cytosol, peroxisome, plastid	74.11	72.07
HORVU6Hr1G020740.1	Barley	cytosol	33.33	67.63
Os08t0562600-03	Rice	plastid	64.54	62.54
TraesCS6D01G104000.1	Wheat	cytosol	63.83	62.28
TraesCS6A01G115400.1	Wheat	cytosol	64.18	60.33
HORVU6Hr1G020750.2	Barley	cytosol	59.57	60.0
GSMUA_Achr10P...	Banana	cytosol	45.74	59.17
TraesCS6B01G143000.1	Wheat	cytosol	61.7	58.98
Os09t0571200-01	Rice	cytosol	59.93	58.28
Zm00001d019750_P001	Maize	cytosol	62.41	54.32
Zm00001d005315_P001	Maize	cytosol, extracellular	62.41	53.17
CDX87149	Canola	cytosol	39.72	52.34
GSMUA_Achr11P...	Banana	cytosol	12.41	51.47
CDY16874	Canola	cytosol	39.72	51.14
KRH38406	Soybean	nucleus	48.94	49.11
Solyc06g036110.1.1	Tomato	cytosol, extracellular	42.91	48.79
Bra026474.1-P	Field mustard	cytosol	44.68	48.65
VIT_16s0050g01310.t01	Wine grape	cytosol	45.04	47.39
PGSC0003DMT400076930	Potato	cytosol	45.04	47.04
KRH08884	Soybean	cytosol	41.49	45.7
VIT_16s0050g01300.t01	Wine grape	cytosol	43.26	45.52
VIT_16s0050g00850.t01	Wine grape	cytosol	45.39	44.76
AT5G23950.2	Thale cress	cytosol	36.88	44.26
KRH08885	Soybean	cytosol	33.69	39.75
PGSC0003DMT400026228	Potato	cytosol	46.45	37.32
Solyc03g025340.1.1	Tomato	cytosol	45.04	36.39
Zm00001d012336_P001	Maize	mitochondrion	40.07	34.56

Protein Annotations

EMBL:BT040634	EnsemblPlants:Zm00001d031892_P001	EnsemblPlants:Zm00001d031892_T001	EnsemblPlantsGene:Zm00001d031892	EntrezGene:100273265	Gene3D:2.60.40.150
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52
PFAM:PF00168	PFscan:PS50004	ProteinID:ONM03899.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
UniParc:UPI00017B8199	UniProt:B4FU46	MapMan:35.2	:	:	:

Description

Calcium-dependent lipid-binding (CaLB domain) family protein

Coordinates

chr1:+:205442994..205443842

Molecular Weight (calculated)

29418.1 Da

IEP (calculated)

4.446

GRAVY (calculated)

-0.455

Length

282 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSASNLKNV NWRNGDLRPY AVLWVDDGPK CSTRVDPDNG EDPVWDEKVV VPVPPASAAR LGDAVLHIDV VHAAGDDADA VKPLVGSARL
101: PLRDVLDDAG GVGGARVSRT LRLKRPSGRP QGRLEARVAV REAAPPPRYY DPNPYPAPAY GNPGAARDPY YAAPPAYGGQ PPYAAPPVGY PADAPPPYGG
201: GYGYGAAAPT AYGAEAAPLP AQQQKSSKMG MGTGLAVGAA AGLLGGLALA EGASYVEDKF EDRVAERVEE ETFGDGDYDD DY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.