CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031892_P001	Maize	cytosol	72.07	74.11
HORVU6Hr1G020740.1	Barley	cytosol	31.03	64.75
GSMUA_Achr10P...	Banana	cytosol	44.48	59.17
Os08t0562600-03	Rice	plastid	58.97	58.76
TraesCS6A01G115400.1	Wheat	cytosol	60.0	58.0
HORVU6Hr1G020750.2	Barley	cytosol	55.17	57.14
Os09t0571200-01	Rice	cytosol	56.9	56.9
TraesCS6D01G104000.1	Wheat	cytosol	56.55	56.75
TraesCS6B01G143000.1	Wheat	cytosol	56.9	55.93
CDX87149	Canola	cytosol	38.28	51.87
EER98534	Sorghum	cytosol	58.62	51.2
GSMUA_Achr11P...	Banana	cytosol	11.72	50.0
Solyc06g036110.1.1	Tomato	cytosol, extracellular	42.76	50.0
CDY16874	Canola	cytosol	37.59	49.77
PGSC0003DMT400076930	Potato	cytosol	43.79	47.04
KRH38406	Soybean	nucleus	44.14	45.55
KRH08884	Soybean	cytosol	40.0	45.31
Bra026474.1-P	Field mustard	cytosol	40.34	45.17
VIT_16s0050g01310.t01	Wine grape	cytosol	41.38	44.78
AT5G23950.2	Thale cress	cytosol	36.21	44.68
VIT_16s0050g01300.t01	Wine grape	cytosol	39.66	42.91
VIT_16s0050g00850.t01	Wine grape	cytosol	40.34	40.91
KRH08885	Soybean	cytosol	31.03	37.66
Solyc03g025340.1.1	Tomato	cytosol	43.79	36.39
PGSC0003DMT400026228	Potato	cytosol	43.79	36.18
KXG33717	Sorghum	mitochondrion	37.93	28.5

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.2	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5YH53	EnsemblPlants:EES15243
ProteinID:EES15243	ProteinID:EES15243.3	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005975	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168
PFscan:PS50004	PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	SMART:SM00239	EnsemblPlantsGene:SORBI_3007G165701	SUPFAM:SSF49562
UniParc:UPI000B42586E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:60044139..60045011

Molecular Weight (calculated)

29855.4 Da

IEP (calculated)

4.307

GRAVY (calculated)

-0.370

Length

290 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGSASNLKNV NWRNGDLRPY AVLWVDDGPK CSTRVDPDNG EDPVWDDRVV VPVPPASAAR LGDAVLHVDV VHAADADADA DEVKPLVGSA
101: RLPLRDVLDD AGGVGVGGPK VSRTLRLKRP SGRPQGRVEV RVAVREAPPP PSYYDPSPYP APAYGNPAAA RDPYYAAPPA YGGQPPYAAP PVGYPAAAAA
201: AAPPPYGGGY GAAPAAAYTY GDPAAAPAAQ KSSKMGMGTG LAVGAAAGLL GGLALAEGAS YVEDKFEDHV AEKVEEETFG DGDGDYDDDY

Best Arabidopsis Sequence Match ( AT5G23950.2 )
(BLAST)

001: MLFSSCKIIF QYTLKEMSSH GREVEVTISS AKDIKNVNWR NGPNKPYAVV WIDPKFKSST RVDEDGNTCT TWNETFVIAL PPANDDDDKV YINIVHAGRE
101: ENTKPLIGSA HLSLRDVIDD VGFGVPFMKT LKLKRPSGRP QGKLDVTVTV RETPGSNYAL PYGDPYAPEK GSKFGGMGTG LAVGAVAGVL GGVALAEGLE
201: AVEGDEDDDD DDDAAAAAAA DDDDDDDDDD DDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.