Factsheet for HORVU4Hr1G000850.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G520000.1	Wheat	cytosol	84.36	87.86
TraesCS4D01G001900.1	Wheat	cytosol	85.28	85.8
TraesCS7D01G509700.1	Wheat	cytosol	80.67	80.43
TraesCS4B01G001000.1	Wheat	cytosol	85.58	80.4
TraesCS7B01G436400.1	Wheat	cytosol	76.07	76.78
TraesCS7B01G436800.1	Wheat	cytosol	68.71	76.71
TraesCS4A01G312300.1	Wheat	cytosol	76.99	76.29
HORVU6Hr1G020740.1	Barley	cytosol	29.14	68.35
Zm00001d019750_P001	Maize	cytosol	65.95	66.36
HORVU6Hr1G020750.2	Barley	cytosol	56.13	65.36
EER98534	Sorghum	cytosol	65.34	64.16
Zm00001d005315_P001	Maize	cytosol, extracellular	63.19	62.24
GSMUA_Achr10P...	Banana	cytosol	37.12	55.5
CDX87149	Canola	cytosol	35.28	53.74
Solyc06g036110.1.1	Tomato	cytosol, extracellular	38.96	51.21
CDY16874	Canola	cytosol	34.36	51.14
GSMUA_Achr11P...	Banana	cytosol	10.43	50.0
PGSC0003DMT400076930	Potato	cytosol	40.49	48.89
KRH08884	Soybean	cytosol	38.34	48.83
VIT_16s0050g01310.t01	Wine grape	cytosol	39.57	48.13
Bra026474.1-P	Field mustard	cytosol	38.04	47.88
AT5G23950.2	Thale cress	cytosol	34.05	47.23
VIT_16s0050g01300.t01	Wine grape	cytosol	38.65	47.01
KRH38406	Soybean	nucleus	40.49	46.98
VIT_16s0050g00850.t01	Wine grape	cytosol	37.42	42.66
KRH08885	Soybean	cytosol	29.14	39.75
Solyc03g025340.1.1	Tomato	cytosol	42.02	39.26
PGSC0003DMT400026228	Potato	cytosol	40.49	37.61
HORVU3Hr1G085130.1	Barley	plastid	31.6	27.99

Protein Annotations

EMBL:AJ630120	EMBL:AK365314	EnsemblPlants:HORVU4Hr1G000850.1	EnsemblPlantsGene:HORVU4Hr1G000850	Gene3D:2.60.40.150	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892
PANTHER:PTHR32246	PANTHER:PTHR32246:SF52	PFAM:PF00168	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI00004CF8A0	UniProt:Q5DVL6	MapMan:35.2	:	:

Description

C2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q5DVL6]

Coordinates

chrchr4H:-:1301221..1303023

Molecular Weight (calculated)

32669.0 Da

IEP (calculated)

5.434

GRAVY (calculated)

-0.353

Length

326 amino acids

Sequence
(BLAST)

001: MGSRYEVEVT VGAARDLKNV NWRNGDLKPY AVLWIDAGAR CSTRVDLDNG ENPTWDDKVV VPLPPASRLQ DAVLYLDIVH ANAPEGVKPL VGSARLPLRD
101: VVDDAGVGGK VSRNLKLKRP SGRPQGKLDV RVAVREPARY YDPNPGAYPA PAGYGSSRDA YGGGYGAGAG AGGYGAAAGA GGYGAYAAAA APPSGYPGYG
201: STAPPPQAAA PYGSAPAPYG AAPPPPQGAA GAYGSSAPAY GAAQPAQGAG YGTTGVALDQ SGGKKKKGMG MAGGLAVGAA AGVLGGLALA GGASYVENKI
301: EDRVTERVEE DMYGGGYGDY GGDDDY

Best Arabidopsis Sequence Match ( AT5G23950.1 )
(BLAST)

001: MSSHGREVEV TISSAKDIKN VNWRNGPNKP YAVVWIDPKF KSSTRVDEDG NTCTTWNETF VIALPPANDD DDKVYINIVH AGREENTKPL IGSAHLSLRD
101: VIDDVGFGVP FMKTLKLKRP SGRPQGKLDV TVTVRETPGS NYALPYGDPY APEKGSKFGG MGTGLAVGAV AGVLGGVALA EGLEAVEGDE DDDDDDDAAA
201: AAAADDDDDD DDDDDDDDE

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FF85]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.